Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., C4-dicarboxylate transport system, permease large protein transmembrane from Sinorhizobium meliloti 1021

 Score = 58.5 bits (140), Expect = 8e-13
 Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 25/256 (9%)

Query: 207 LFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGT 266
           LF+L G ++   G     + +  +++G   GG A   + A  + G +SGS +A+VV  G+
Sbjct: 63  LFLLAGLLMVHGGLAPRIVNLCAAVVGQRTGGLAIVMIAACMMFGSLSGSGVADVVAIGS 122

Query: 267 FTIPLMKRVGF-PGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEY---VGISYVEVIKAA 322
             +P MK  G+ PG  A  +  A S  G + PP     + +++ Y    G S  ++   +
Sbjct: 123 MLLPAMKERGYHPGFSAAGLGCAGSL-GTVIPP-----SIVLIVYGTATGTSIGQLFIHS 176

Query: 323 ILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISAVVYYGI 382
           I P ++    L+ +    + K G  G      + +   L      +L   +I   + +GI
Sbjct: 177 IGPGILLGFGLMVVAWWISRKNGWKGGEPFSWTRLGTALRESVLALLAPVIIVGGIRFGI 236

Query: 383 GWTKEAFG-DAATPILTVVLLAAYVGLVKISAPYAKEGLGIDENLQYVPDVAPTLKSGLH 441
               EA G   A  +L   L+   + L K+                 + D      S L 
Sbjct: 237 FTPTEAAGIGVAYALLVGALIYRQLTLAKV--------------FSLLRDTTEMTGSILI 282

Query: 442 YLLPIVVLVWCLTVER 457
            +    V  W LTVE+
Sbjct: 283 VIAAASVFGWILTVEQ 298



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 70/303 (23%), Positives = 104/303 (34%), Gaps = 91/303 (30%)

Query: 399 VVLLAAYVGLVKISAPYAKEGLGIDENLQYVPDVAPTLKSGLHYLLPIVVLVWCLTVERF 458
           +VL A ++ L+ I AP A               +A  L S + YLL   VL   +  +R 
Sbjct: 6   LVLFAVFILLLLIDAPIA---------------IALALSS-VAYLLVGDVLPLMVVAQRM 49

Query: 459 SPGLSAFWASVFMIFIL-------------LTQRPLMALFNRTGSL-----------GDA 494
             G+ +F      +F+L             +       +  RTG L           G  
Sbjct: 50  VAGIDSFTLLAIPLFLLAGLLMVHGGLAPRIVNLCAAVVGQRTGGLAIVMIAACMMFGSL 109

Query: 495 AKEGVTDLLE--SLVSGARNMIGIGVATAAAGT----VVGVVTLTGIGLVMTDFVEFISG 548
           +  GV D++   S++  A    G     +AAG      +G V    I L++       S 
Sbjct: 110 SGSGVADVVAIGSMLLPAMKERGYHPGFSAAGLGCAGSLGTVIPPSIVLIVYGTATGTSI 169

Query: 549 GNLMLMLIFTAVISLILGMGLPTTANYIV-----------------------VSTLMAPV 585
           G L +  I   ++   LG GL   A +I                        V  L+APV
Sbjct: 170 GQLFIHSIGPGIL---LGFGLMVVAWWISRKNGWKGGEPFSWTRLGTALRESVLALLAPV 226

Query: 586 IVTLGAEHGLIIPLIAVHLFVFY-----------------FGILADDTPPVG--LAAFAA 626
           I+  G   G+  P  A  + V Y                 F +L D T   G  L   AA
Sbjct: 227 IIVGGIRFGIFTPTEAAGIGVAYALLVGALIYRQLTLAKVFSLLRDTTEMTGSILIVIAA 286

Query: 627 AAI 629
           A++
Sbjct: 287 ASV 289