Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 5/130 (3%)

Query: 207 LFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGT 266
           +F+L G + ER G     +  A S++G   GG A  AV+   + G +SGS  A+     T
Sbjct: 60  VFILAGLIFERVGVARQLVSFASSIVGARNGGLAIVAVLVCMVMGGISGSGPADAAAVAT 119

Query: 267 FTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYV--GISYVEVIKAAIL 324
             IP + + G+P   + +V  A +    L PP   + AF++   +    S   +    ++
Sbjct: 120 VMIPSLHKAGYPKAFSASVIAAGAATAILIPP---SVAFIIYSVLVPQASVPALFAGGLI 176

Query: 325 PALISYIALI 334
           P L++ ++L+
Sbjct: 177 PGLLAGLSLL 186



 Score = 25.4 bits (54), Expect = 0.007
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 581 LMAPVIVTLGAEHGLIIPLIAVHLFVFY 608
           L+APVI+  G   GL  P  A  + VFY
Sbjct: 220 LLAPVIILGGLRLGLFTPTEAAVVAVFY 247