Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., TRAP transporter, subunit DctM from Phaeobacter inhibens DSM 17395

 Score = 65.5 bits (158), Expect = 6e-15
 Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 13/212 (6%)

Query: 207 LFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGT 266
           LF+L G +L R G    F+ VA ++    RGG   A V+  G+   +SGS  A     G 
Sbjct: 74  LFILTGDVLVRTGLSKKFLDVAEALTCWTRGGFGSATVLVCGMFAAISGSDAAGAAAVGR 133

Query: 267 FTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYV-GISYVEVIKAAILP 325
            TI  +   G+P   A A+  A +  G L PP   + A++++  V GIS   +  AA++P
Sbjct: 134 MTIARLVESGYPRPYACALVAAGACTGILIPP---SIAYIIIGLVLGISASTLFLAALIP 190

Query: 326 ALISYIAL----IYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISAVVYYG 381
            +   +++    I +  L   + G +         + Q L S         ++  +++YG
Sbjct: 191 GIAILVSILVTNIIMNRLYTYETGGNMGLGEWLGNLGQSLKSGWYAF----IVPGIIFYG 246

Query: 382 IGWTKEAFGDA-ATPILTVVLLAAYVGLVKIS 412
           I   +    +A AT ++  +L+   +G +K++
Sbjct: 247 IFSGRLTPTEAGATAVVVTILMGFLLGTLKLA 278