Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score = 78.2 bits (191), Expect = 9e-19
 Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 22/262 (8%)

Query: 208 FVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGTF 267
           F+L G  L   G     I  A +M+GH  GG   A V+A  L   VSGSS A VV  G+ 
Sbjct: 62  FILAGNFLTHGGVARRMINFASAMVGHFYGGLGLAGVLACALFAAVSGSSPATVVAIGSI 121

Query: 268 TIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEY---VGISYVEVIKAAIL 324
            +P M R GFP      V   +   G L PP     + +MV Y      S   +  A ++
Sbjct: 122 LLPAMVRAGFPNRFGAGVITTSGALGILIPP-----SIVMVMYSVATNTSVGALFMAGVI 176

Query: 325 PALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISAVVYYGIGW 384
           P L+    L  +    A K      PR  +++  ++ ++F  ++ GL +I  +V  GI  
Sbjct: 177 PGLLLAFTLGMVTWYRAKK---FDYPRMPKASWGERWVAFRKSVWGLMLI-VIVMGGI-- 230

Query: 385 TKEAFGDAATPILTVVLLAAYVGLVKISAPYAKEGLGIDENLQYVPDVAPTLKSGLHYLL 444
               +    TP     + A Y  +V   A +  + +G+ +  + + D A  + + L Y++
Sbjct: 231 ----YTGMFTPTEAAAMSAVYAFIV---AVFVYKDMGLKQIPKVLLDSA-NMSAMLLYII 282

Query: 445 PIVVLVWCLTVERFSPGLSAFW 466
              VL   L      P L A W
Sbjct: 283 TNAVLFSFLMTNENIPQLLAEW 304



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 18/130 (13%)

Query: 555 LIFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILAD 614
           L+   V+ L+ G  +  ++  ++++ ++ PV V LG +      LI V++ V   G+   
Sbjct: 316 LLAVNVLLLVAGNFMEPSSIVLIMAPILFPVAVKLGIDPVHFGILIVVNMEV---GMCH- 371

Query: 615 DTPPVGLAAFAAAAIAKSDPIRTGIQGFAYDIRTAILPFMFVFNTQLLLMGIDSWWHLML 674
             PPVGL  + A+ I K      GI     ++  A+ P++    + L  +G+ ++W  + 
Sbjct: 372 --PPVGLNLYVASGITK-----MGIT----ELTIAVWPWLL---SMLCFLGLVTYWPTLS 417

Query: 675 TILSSITAML 684
             L     ML
Sbjct: 418 LWLPRTLGML 427