Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 5/130 (3%)

Query: 207 LFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGT 266
           +FVL G + ER+G     ++ A +++G  RGG A AA++   + G +SGS  A+     T
Sbjct: 59  VFVLAGMIFERSGVALRLVRFAVALVGQRRGGLALAAILVCMVLGGISGSGPADAAAVAT 118

Query: 267 FTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYV--GISYVEVIKAAIL 324
             IP M R G+P   + +V  AA +   L PP   +  F++   +    S   +  A ++
Sbjct: 119 VMIPSMARAGYPAAFSASVIAAAGSTAILIPP---SIVFILYSVLVPQASVPALFAAGLI 175

Query: 325 PALISYIALI 334
           P L++ +AL+
Sbjct: 176 PGLLAGLALM 185



 Score = 29.6 bits (65), Expect = 4e-04
 Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 29/160 (18%)

Query: 502 LLESLVSGARNMIGIGVAT--AAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLIFTA 559
           L+ES    A  M+ I +A+  A AG+ +G     G  LV          GN   +L+   
Sbjct: 270 LVESAEVSAVVMLIIALASVFAWAGSTLGTFEALGGWLVGLS-------GNETAILLAVT 322

Query: 560 VISLILGMGLPTTANYIVVSTLMAP-------------VIVTLGAEHGLIIPLIAVHLFV 606
           ++ LI GM L   +   +    + P             VI+T+    G   P +A++L V
Sbjct: 323 LLLLIAGMFLDAVSILFIFMPFLLPVILHFGWDPVWFGVILTMNVAIGQFTPPMAINLMV 382

Query: 607 F--YFGILADDTPP-----VGLAAFAAAAIAKSDPIRTGI 639
                GI  +DT P     VG    A   +     + TGI
Sbjct: 383 TSRIAGIRIEDTVPWVLWMVGAMLSALLLVTFVPELATGI 422