Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., TRAP dicarboxylate transporter, DctM subunit from Marinobacter adhaerens HP15

 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 11/206 (5%)

Query: 193 VFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGL 252
           +F +      + + LF+   +MLERAG       V +  +G + GG A A +VAS +   
Sbjct: 101 IFPLMANPDIAAIPLFIFMASMLERAGLIEEMFSVVYKWMGGISGGLAAATIVASTILAA 160

Query: 253 VSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVG 312
           + G   A VVT G   +P M +  +    A    +A  T G L PP + A  + +V    
Sbjct: 161 MVGVIGAAVVTMGIIALPAMLKRHYDHKIAIGSIMAGGTLGILIPPSILAILYAVVAQQS 220

Query: 313 ISYVEVIKAAILPAL-ISYIALIYIVHLEACKAGMS-GLPRRHQSTVAQKLLSFTATILG 370
           +   E+   ++LP L +S + L Y++        +   +P   + ++ +KL      I  
Sbjct: 221 VG--ELYLGSLLPGLMLSGLYLTYVLVRSWLNPKLGPPIPVEDRISLKEKLKLLGNLIAP 278

Query: 371 LCVISAVVYYGIGWTKEAFGDAATPI 396
           L ++  V+  G+      FG  ATP+
Sbjct: 279 LALVGLVL--GL-----LFGGIATPV 297