Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 62.4 bits (150), Expect = 5e-14
 Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 14/220 (6%)

Query: 207 LFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGT 266
           +FVL GA++   G     I     ++G +RGG A   +  S     +SGS++A+V   G+
Sbjct: 62  MFVLAGAIMNAGGITDRLINFVTCIIGFVRGGLAHVNIGVSLFFAEISGSAVADVAAMGS 121

Query: 267 FTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAAILPA 326
             IP MK+ G+ G  + AV  ++++   + PP       L      +S  ++  A I+P 
Sbjct: 122 VMIPQMKKRGYSGAFSAAVTSSSASLAIIIPP--SIPMILYATSANVSVEQLFVAGIVPG 179

Query: 327 LISYIALIYIVHLEACK------AGMSGLPRRHQSTVAQKLLSFTATILGLCVISAVVYY 380
           L+    L+ + ++ A +         SG  RR   T    L +F   +    +I   ++ 
Sbjct: 180 LMGAAGLMGVAYVFARRYDLPREEAFSG--RRLWETFIDALPTFALPV----IILGGIFG 233

Query: 381 GIGWTKEAFGDAATPILTVVLLAAYVGLVKISAPYAKEGL 420
           G     EA G A    + V L    V L ++ +     G+
Sbjct: 234 GFVTATEAAGLAVLAAILVSLYYRQVNLGRLKSAMLDGGM 273



 Score = 32.7 bits (73), Expect = 4e-05
 Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 21/156 (13%)

Query: 481 LMALFNRTGSLGDAAKEGVTDLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMT 540
           L++L+ R  +LG         L  +++ G      + V  AA+  + G +T   +   + 
Sbjct: 251 LVSLYYRQVNLGR--------LKSAMLDGGMQTAVVMVLVAASVVMGGFLTRAQVPQEIA 302

Query: 541 DFVEFISGGNLMLMLIFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLG---AEHGLII 597
             +  I+    +++LI      LI+G  L + A  I+V  ++ P+IV         GL++
Sbjct: 303 QNILEITDNKWVILLILNFFF-LIIGFFLHSAAAIILVVPIVIPLIVAADINPIHFGLVV 361

Query: 598 PLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSD 633
            L            +   TPPV      A A+A+++
Sbjct: 362 TLNLA---------IGQQTPPVASVLITACAVARAN 388