Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 72.8 bits (177), Expect = 4e-17
 Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 151 LMMVAALFLLYTFAG-PYMPDVIAHKGASL--NKAMSHLWLTTEGVFGVALGVSTSFVFL 207
           L+    LFLL+   G P    ++A  G  L  N     + L    V+          +  
Sbjct: 2   LIWFLPLFLLFLMIGLPVFFGLLAAPGLLLWLNGQERDITLLYRNVYNGMDSFPLMAIPF 61

Query: 208 FVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGTF 267
           F+L G ++ R G     ++ A +++GH RGG A   +++S L   +SGS++A+    G+ 
Sbjct: 62  FMLAGELMNRGGITLRLVEFAQALMGHFRGGLAHVNILSSMLFAGLSGSAVADTSALGSM 121

Query: 268 TIPLMKRVGFPGTKAGAVEVAASTNGQLTPP--IMGAAAFLMVEYVGISYVEVIKAAILP 325
            IP M++ G+    A A+  A+S  G + PP  IM   A++M E V   ++    A I+P
Sbjct: 122 LIPAMEKQGYTRRFAAAITAASSVIGPIIPPSGIMIIYAYVMGESVAALFL----AGIVP 177

Query: 326 ALISYIALIYIVHLEACK 343
            ++  + L+ +V L A K
Sbjct: 178 GILVGVGLMGVVKLMADK 195



 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 24/158 (15%)

Query: 507 VSGARNMIG-IGVATAAAGTVVG-------VVTLTGIGLVMTDFVEFISGGNLMLMLIFT 558
           VS   +++G  G+ +A    +VG       VV+L+    +M DF+  +S   L+L+L+  
Sbjct: 262 VSDLPDILGRAGITSAVVLLLVGAAMAFKTVVSLSYAPQIMADFMLSLSENPLILLLLIN 321

Query: 559 AVISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDTPP 618
            ++  ++GM L      I++  ++ P+ V LG +      +++V+L V   G+    TPP
Sbjct: 322 LLL-FVVGMFLDAGPAIIILGPILGPIFVDLGVDPIHFAIIMSVNLTV---GLA---TPP 374

Query: 619 VGLAAFAAAAIAKSDPIRTGIQGFAYDIRTAILPFMFV 656
           +GL  F A++++     R         I  AILPF+ V
Sbjct: 375 MGLVLFVASSVSGERVER---------IAKAILPFLAV 403