Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 26/198 (13%)

Query: 152 MMVAALFL---------LYTFAGPYMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVST 202
           +M+ A+FL         L  F G ++  V+ H  A+L++  +  + T           S 
Sbjct: 13  LMLGAIFLRVPIAVAMGLTGFIGTWV--VLGHPNATLSQMKTLTYDTFSSY-------SL 63

Query: 203 SFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVV 262
           S V LF+L G    ++G  A   + A   LGH +GG A AAV A    G V GSS+A   
Sbjct: 64  SIVPLFLLMGQFATKSGMSAALFQAASDWLGHRKGGVAMAAVGACAGFGAVCGSSLATAS 123

Query: 263 TTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIK-- 320
           T G   +P MK+ G+  + +  V  A  T G L PP     + ++V Y  ++   ++K  
Sbjct: 124 TMGQVALPEMKKRGYSDSLSTGVLAAGGTLGILIPP-----SVILVIYAILTQQNIVKMF 178

Query: 321 -AAILPALISYIALIYIV 337
            AA++P +I+ +  +  V
Sbjct: 179 IAALIPGIIAALGYMLTV 196



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 14/99 (14%)

Query: 552 MLMLIFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGI 611
           +++L    V  LI G  + + +  ++   +  P+++ L  + GL     A+     +FGI
Sbjct: 331 LVVLSAMLVCYLIFGCVMDSLSMILLTIPIFFPIVMAL--DFGLTPEQAAI-----WFGI 383

Query: 612 LADD-------TPPVGLAAFAAAAIAKSDPIRTGIQGFA 643
           LA         TPPVG+  F   ++A+  P+    +G A
Sbjct: 384 LALIVVEVGLITPPVGMNLFIINSMARDVPMGRTYRGVA 422