Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., TRAP transporter large permease from Ralstonia sp. UNC404CL21Col

 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 25/217 (11%)

Query: 208 FVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGTF 267
           F+L G ++   G     ++ A S++GH RGG   A VVA  L G VSGS  A+    G  
Sbjct: 61  FILSGELMLHGGIADRILRFAQSLVGHFRGGLGMANVVACTLFGGVSGSPTADTSAMGGV 120

Query: 268 TIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMV-----------EYVGISYV 316
            IPLMKR G+    A  V   AS  G L P       +              +  G+S  
Sbjct: 121 VIPLMKREGYSAAYAVNVTTHASLAGALMPTSTNMIIYAFAAQGIVGSLNGQQVSGVSIG 180

Query: 317 EVIKAAILPALISYIALIYIVHLEACKAGMSGLPRRHQST-----------VAQKLLSFT 365
           +++ + +LP L     + +++     +A   G PRR   +           VA+  +   
Sbjct: 181 DLLFSGLLPVL---WVMGFVLIAAYWQAKRYGFPRRADGSTELPPFPGWLAVARAFVGAV 237

Query: 366 ATILGLCVISAVVYYGIGWTKEAFGDAATPILTVVLL 402
             ++ + +I   V  GI    EA   A    L + +L
Sbjct: 238 PGLMVIALILVCVAMGIATATEAAAIAVAYSLCLTVL 274