Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., TRAP transporter, DctM subunit from Paraburkholderia bryophila 376MFSha3.1

 Score = 72.0 bits (175), Expect = 1e-16
 Identities = 76/312 (24%), Positives = 127/312 (40%), Gaps = 25/312 (8%)

Query: 106 SAAYIYLFYAELAGRSGAPTQFDVIASVVGMVLLLEATRRALGPPLMMVAALFL---LYT 162
           +A  + L    L  RS         A V G+ + L   R+AL P   +   LF    + T
Sbjct: 166 AALMLVLAITRLLERSSLRDCLKAFALVAGVAIALYIARQALAPLTALSLVLFFAVGVIT 225

Query: 163 FAGPYMPDVIAH-----------KGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLF 211
                +P ++A             GA L   +S +    +G+  + L      V LF+L 
Sbjct: 226 IICLGVPIMVAFGVCTFAYLATVTGAPLTIVVSTM---NQGMSSLILLA----VPLFILL 278

Query: 212 GAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPL 271
           GA++E  G     I+   S++GH RGG A   + A  L   +SGS +A++        P 
Sbjct: 279 GALMEAMGLAEAMIRFLASLIGHKRGGLAYVLIGAMYLVSGISGSKVADMAALAPGLFPE 338

Query: 272 MKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAAILPALISYI 331
           MK+ G       A+  +A+   +  PP +      +    G+S   +     +PA++  +
Sbjct: 339 MKKRGANEGDLVAMLSSAAAMSETIPPSL--VLITIGSVTGVSIAALFTGGFMPAVVGAV 396

Query: 332 ALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFTATILGLCVISAVVYYGIGWTKE--AF 389
           AL  +V  ++ +  + G+ R     V +  L     +    VI A V  GI    E    
Sbjct: 397 ALAAVVWFKSRRESLQGVQRASWGEVGRAFLISLPALALPFVIRAAVVEGIATATEVATI 456

Query: 390 GDAATPILTVVL 401
           G A T ++ ++L
Sbjct: 457 GVAYTCVVGLLL 468