Pairwise Alignments

Query, 145 a.a., universal stress protein from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., universal stress protein UspE (RefSeq) from Shewanella amazonensis SB2B

 Score = 48.9 bits (115), Expect = 7e-11
 Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 5/139 (3%)

Query: 10  DLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQMKNDVRAQL 69
           D   Q    K ++ A   A   +A++HL+N  PG  +++ A   P   A      +R Q 
Sbjct: 166 DPEHQALNGKVIEYAQNLAAQFDAKVHLVNGYPGTPVNL-AIELPDFDAHSYNESIRMQH 224

Query: 70  KAFAEKHIAEEV---VYKLHIAEGKPYATILDYAERLGADLIVMPSHKRSRIDKVMLGSV 126
           +   + ++A      V   H+ EG P   I + A  L A+L+++ +  R+ +   ++G+ 
Sbjct: 225 EQRVQ-YLATSYGIPVEACHVKEGLPEDVIPELAVDLDAELVILGTVGRTGLSAALIGNT 283

Query: 127 ASKVVENSPINVMVVKPQG 145
           A  V+++   +++ +KP G
Sbjct: 284 AEHVIDSLNCDLLAIKPDG 302



 Score = 36.2 bits (82), Expect = 5e-07
 Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 8/146 (5%)

Query: 2   YKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQM 61
           YK +LV VD  +      A++ AV  A+ + A I +   +      M +     +  A M
Sbjct: 4   YKKLLVVVDPTKD--KQPALERAVALAEKNQASITVFLSIFDFSYEMTSILSAHEREA-M 60

Query: 62  KNDVRAQLKAFAEKHIAEEVVYKLHIA-----EGKPYATILDYAERLGADLIVMPSHKRS 116
           +  V  Q  A+    IA  +   + I        +P+ +I++YA   G DLIV  +H+  
Sbjct: 61  RKGVIDQRVAWLGDLIAPFIQDGIDIQTQVVWHNRPFESIINYAIEGGFDLIVKGTHEHD 120

Query: 117 RIDKVMLGSVASKVVENSPINVMVVK 142
           ++  V+       ++  +P+ V++VK
Sbjct: 121 KLKAVIFTPTDWHLMRKAPVPVLLVK 146