Pairwise Alignments

Query, 145 a.a., universal stress protein from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., UspA domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 43.9 bits (102), Expect = 2e-09
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 20/149 (13%)

Query: 1   MYKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLP----GIHMSMVATYFPKD 56
           M+ +I+   D ++   AD A Q A   A+   A+++L +       G++ S         
Sbjct: 162 MFSNIVFSTDFSKP--ADAAFQFAYRTAREVGAKLYLFHACDLGGSGLYPSQ-------- 211

Query: 57  AAAQMKNDVRAQLKAFAEKHIAEEVVY---KLHIAEGKPYATILDYAERLGADLIVMPSH 113
             A+++  +    K   ++++++   Y   ++ I EG PY  IL YA    ADLIVM  H
Sbjct: 212 --AEIERQLERARKQMQDRYVSKMTDYDNYQVEIWEGTPYVEILKYARDRKADLIVMAHH 269

Query: 114 KRS-RIDKVMLGSVASKVVENSPINVMVV 141
            R    +   +GS   +VV  S   V  V
Sbjct: 270 AREVPAEDAEIGSTVEQVVLRSACPVASV 298



 Score = 39.3 bits (90), Expect = 5e-08
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)

Query: 60  QMKNDVRAQLKAFAEKHIAEEVVYKLHIAEGKPYATILDYAERLGADLIVMPSHKR---- 115
           ++K+   AQ K F   + A      L +A G P+  IL +A + G DLIVM +H R    
Sbjct: 72  ELKHVYEAQFKEFGPPNAA------LQLAVGVPHTEILRFARQEGVDLIVMGAHGRDEDA 125

Query: 116 --SRIDKVMLGSVASKVVENSPINVMVV 141
             SR+ + ++G+   KV +++   V++V
Sbjct: 126 AASRV-RSIIGNTMQKVSKSARCPVLIV 152