Pairwise Alignments

Query, 145 a.a., universal stress protein from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., UspA domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 56.2 bits (134), Expect = 4e-13
 Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 15/144 (10%)

Query: 2   YKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQM 61
           ++ IL+  D +   +   A   A+  A+  +A++H+L V            FP  A  Q+
Sbjct: 148 FRSILLATDGSR--YCTYAAVTALQLAREHDADLHVLYVAD--------LTFPDSAEGQL 197

Query: 62  KNDV-----RAQLKAFAEKHIAEEVVYKLHIAEGKPYATILDYAERLGADLIVMPSHKRS 116
             D+     RA ++A A +   E V  + H+A+G+    IL  A RLGA+ + + SH + 
Sbjct: 198 AADMEVEHGRAVVEAIAARAAQEGVRARGHVAQGEAAERILATARRLGAECLFIASHGKG 257

Query: 117 RIDKVMLGSVASKVVENSPINVMV 140
            + +++LGSVA +VV ++ I V V
Sbjct: 258 GLARLLLGSVAEEVVASAHIPVYV 281



 Score = 42.0 bits (97), Expect = 8e-09
 Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 89  EGKPYATILDYAERLGADLIVMPSHKRSRIDKVMLGSVASKVVENSPINVMVVKPQG 145
           EG+P+  I+D A RL ADL+ M    RS + +++ G+V  + + +S  +V++V PQG
Sbjct: 88  EGEPFEVIVDTARRLKADLVAMGVADRSALGRLVRGNVPLRTIGHSERDVLLV-PQG 143