Pairwise Alignments

Query, 145 a.a., universal stress protein from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., universal stress protein UspE (RefSeq) from Shewanella sp. ANA-3

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 5/139 (3%)

Query: 10  DLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQMKNDVRAQL 69
           D + Q    K ++ A   A    AE+HL+N  PG  +++ A   P D  AQ  ND     
Sbjct: 166 DTDHQMLNGKIIEHAKDLAAKFAAEVHLVNGYPGTPVNL-AIELP-DFDAQTYNDTIRMQ 223

Query: 70  KAFAEKHIAEEV---VYKLHIAEGKPYATILDYAERLGADLIVMPSHKRSRIDKVMLGSV 126
                +++A          H+ EG P   I + AE+L A+L+++ +  R+     ++G+ 
Sbjct: 224 HEQRVQYLANAYGIDTLHCHVKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNT 283

Query: 127 ASKVVENSPINVMVVKPQG 145
           A  V+++   +++ +KP G
Sbjct: 284 AEHVIDSINCDLLAIKPDG 302



 Score = 31.6 bits (70), Expect = 1e-05
 Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 8/146 (5%)

Query: 2   YKHILVPVDLNEQGFADKAVQLAVWHAKHSNAEIHLLNVLPGIHMSMVATYFPKDAAAQM 61
           Y+ ILV VD   +     A+  AV  A  SNA + +   +      M +    ++  A  
Sbjct: 4   YQKILVVVDPTTEH--QVALARAVTLASKSNAHVTVFLSIFDFSYEMTSILSSQEREAMR 61

Query: 62  KNDVRAQLKAF-----AEKHIAEEVVYKLHIAEGKPYATILDYAERLGADLIVMPSHKRS 116
           +  +  +L        A  H+  ++  ++ I   +P+ +I+++A     DLIV  +H   
Sbjct: 62  QGVIDQRLAWIQDLLTAYNHLQLDIDTQV-IWHNRPFESIINHAIAGQYDLIVKGTHAHD 120

Query: 117 RIDKVMLGSVASKVVENSPINVMVVK 142
           ++  V+       ++  +P+ V++VK
Sbjct: 121 KLKAVIFTPTDWHLMRKAPVPVLMVK 146