Pairwise Alignments

Query, 481 a.a., metalloprotease TldD from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Predicted Zn-dependent proteases and their inactivated homologs from Pseudomonas stutzeri RCH2

 Score =  606 bits (1563), Expect = e-178
 Identities = 310/471 (65%), Positives = 361/471 (76%), Gaps = 4/471 (0%)

Query: 10  LLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNIDCGVGVR 69
           LL P GL   D+   L  +A   +D AD+YFQ    ES VLED I+K+G F+++ GVGVR
Sbjct: 12  LLTPGGLGIDDLPGLLGELAGPGVDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVR 71

Query: 70  AVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQGQNLTVQAFKRAQHPAFYGAHNPLESW 129
           A+SGEKTGFAYS+ I  + L+Q+A AAR IA+ GQ   V+   +A     Y   NPL+  
Sbjct: 72  ALSGEKTGFAYSNAITADALRQAAQAARSIARSGQQGQVKVLSKAAFAPLYSRDNPLDGL 131

Query: 130 EKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIRPLVRLSISV 189
            + +K ELLK++D   R  +P I +V+VSL+GV E ILVA  DG  A DIRPLVR ++SV
Sbjct: 132 SRAEKVELLKRIDVATRALDPRIKQVTVSLAGVWEHILVAGMDGGMATDIRPLVRFNVSV 191

Query: 190 LAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEAVAAPAGTMP 249
           + ++  RRERG  GGGGR GY YFL E+     A  +A EA+RQALVNLEAV APAG++P
Sbjct: 192 IVEQNGRRERGGQGGGGRTGYQYFLTEDR----AMGYAREALRQALVNLEAVPAPAGSLP 247

Query: 250 VVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDGTLKDLRGSL 309
           VVLG GW GVLLHEAVGHGLEGDFNRKGSS ++G++G++V S LCTIVDDGTL D RGSL
Sbjct: 248 VVLGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEQVASSLCTIVDDGTLADRRGSL 307

Query: 310 NVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYML 369
           +VDDEG   Q   LIE GILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYML
Sbjct: 308 SVDDEGTPTQCTTLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYML 367

Query: 370 PGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITRPIKGATLIG 429
            GE  P+EII SVKKGIY  + GGGQVDITSGKFVFS SEAYLIE+GKIT P+KGATLIG
Sbjct: 368 AGESDPQEIIRSVKKGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427

Query: 430 SGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
           +G E M +VSMVGNDLALD GVG CGK GQSVPVGVGQPTLK+D +TVGGT
Sbjct: 428 NGPEVMNRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDEITVGGT 478