Pairwise Alignments

Query, 481 a.a., metalloprotease TldD from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Peptidase U62, modulator of DNA gyrase (NCBI) from Rhodospirillum rubrum S1H

 Score =  474 bits (1221), Expect = e-138
 Identities = 245/448 (54%), Positives = 317/448 (70%), Gaps = 6/448 (1%)

Query: 34  DYADIYFQSSWHESLVLEDSIIKDGSFNIDCGVGVRAVSGEKTGFAYSDQIQLEGLKQSA 93
           D  +++ +    ES  L+D  I+  SF+   G G+RAVSGE  GFA++  +    LK++ 
Sbjct: 34  DDGELFLEYRQSESFSLDDGRIRGASFDTTQGFGLRAVSGEAVGFAHASTLDQGALKRAV 93

Query: 94  IAARGIAQQGQNLTVQAFKRAQHPAFYGAHNPLESWEKQQKTELLKQLDAYIRTKEPLIT 153
              R + + G + TV     A + A Y   NPL+  +   K E L  +DA+ R+++P + 
Sbjct: 94  ETVRAV-RGGASGTVALPPAATNRALYTPDNPLDRIDFTTKVETLSAIDAHARSRDPKVV 152

Query: 154 EVSVSLSGVHEQILVAATDGTYAGDIRPLVRLSISVLAQKGD-RRERGSAGGGGRFGYDY 212
           +V  SL+G  + + +    G    D+RPLVRL++SV+ +  + RRE GS G GGR GYD 
Sbjct: 153 QVMASLTGSWQAVRILGAGGRDVSDLRPLVRLNVSVVVEGANGRRETGSHGLGGRVGYDG 212

Query: 213 FLQEEAGQKIAFSFADEAIRQALVNLEAVAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGD 272
            L+E   +    +  +EA+RQALVNLE++ APAG MPVVLG GWPG+LLHEA+GHGLEGD
Sbjct: 213 LLEESTWK----AAVEEALRQALVNLESIDAPAGEMPVVLGPGWPGILLHEAIGHGLEGD 268

Query: 273 FNRKGSSVFAGKVGKKVTSDLCTIVDDGTLKDLRGSLNVDDEGVSGQYNVLIEKGILKGY 332
            NRKG+S F+  +GK+V +   TIVDDGT+ D RGSL++DDEG      V+IE GIL GY
Sbjct: 269 GNRKGTSAFSEGLGKRVAAPGVTIVDDGTIADRRGSLSIDDEGTPTARTVIIEDGILTGY 328

Query: 333 IQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLPGEHTPEEIIASVKKGIYAPNFG 392
           +QD+LNARLMG+ PTGNGRR+SYAH P+PRMTNT+ML G   P  I+ SVK+G+YA NFG
Sbjct: 329 LQDRLNARLMGMKPTGNGRRQSYAHHPLPRMTNTFMLAGADDPAAILGSVKRGLYAVNFG 388

Query: 393 GGQVDITSGKFVFSASEAYLIENGKITRPIKGATLIGSGIEAMQQVSMVGNDLALDRGVG 452
           GGQVD TSGKFVFSASEAYLIENG+I  P+KGATLIG+G + + +VSMVGNDLALD G+G
Sbjct: 389 GGQVDTTSGKFVFSASEAYLIENGRIGAPVKGATLIGNGPDVLTRVSMVGNDLALDPGIG 448

Query: 453 VCGKAGQSVPVGVGQPTLKLDALTVGGT 480
            CGK GQ VPVGVGQPTLK+D+LTVGGT
Sbjct: 449 TCGKEGQGVPVGVGQPTLKVDSLTVGGT 476