Pairwise Alignments

Query, 481 a.a., metalloprotease TldD from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., peptidase U62, modulator of DNA gyrase (RefSeq) from Shewanella loihica PV-4

 Score =  608 bits (1567), Expect = e-178
 Identities = 312/479 (65%), Positives = 381/479 (79%), Gaps = 2/479 (0%)

Query: 3   MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
           + Q+E +LL   GL+   +   ++SI   Q+D++D+YFQ S HES VLED I+K+GSF+I
Sbjct: 4   LTQVEQSLLQD-GLSLDQLQGYINSIHQHQVDFSDLYFQGSRHESWVLEDGIVKEGSFHI 62

Query: 63  DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQGQNLTVQAFKRAQHPAFYGA 122
           + GVGVRA+SGEKTGFAY+D+I    L  +  AARGI+  G +  VQA+K+ +    Y +
Sbjct: 63  ERGVGVRAISGEKTGFAYADEITPAALSAAVEAARGISAAGNSGRVQAWKQHKVTPLYQS 122

Query: 123 HNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIRPL 182
            +P+ + E+ +K  LLKQ DAY+R+ +P I +V +SLSGVHE+ILVAA+DGT A DIRPL
Sbjct: 123 ADPIAAMEEVKKIALLKQADAYVRSLDPRIIQVVISLSGVHEEILVAASDGTLAADIRPL 182

Query: 183 VRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQE-EAGQKIAFSFADEAIRQALVNLEAV 241
           VR + SV+ ++  +RERG++GGGGR  Y  F +  + G    F+FA EA+RQA VNL A+
Sbjct: 183 VRFNCSVVLEQEGKRERGASGGGGRHDYQVFFESGDDGLPSCFAFAREAVRQASVNLTAI 242

Query: 242 AAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDGT 301
            APAG MPVVLG+GWPGVLLHEAVGHGLEGDFNRKGSS F+G VG++V S L T+VDDGT
Sbjct: 243 DAPAGEMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFSGLVGQQVASSLVTVVDDGT 302

Query: 302 LKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMP 361
           L++ RGSL++DDEGV  Q  VLI+ GILKGY+QDKLN RLMG A TGNGRRESYAHLPMP
Sbjct: 303 LENRRGSLSIDDEGVPTQKTVLIQDGILKGYMQDKLNGRLMGQASTGNGRRESYAHLPMP 362

Query: 362 RMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITRP 421
           RMTNTYM  G+ +PE+II SV KGIYAPNFGGGQVDITSGKFVFSASEAYLIE G+IT+ 
Sbjct: 363 RMTNTYMEAGDSSPEDIIKSVDKGIYAPNFGGGQVDITSGKFVFSASEAYLIEKGEITQA 422

Query: 422 IKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
           IKGATLIG+G EAM Q+SMVGNDLALD+GVGVCGK GQSVPVGVGQP+LKLD LTVGGT
Sbjct: 423 IKGATLIGNGPEAMGQLSMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKLDRLTVGGT 481