Pairwise Alignments

Query, 481 a.a., metalloprotease TldD from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., pmba protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 28/312 (8%)

Query: 149 EPLITEVSVSLSGVHEQILVAATD-GTYAGDIRPLVRLSISVLAQKGDRRERGSAGGGGR 207
           +P I     + +  H  + V     G   G       LS SV+ +  DR       G  +
Sbjct: 148 DPRINNSDGASANAHTSVKVYGNSHGFLNGYCSSRYSLSCSVIGE--DRN------GNMQ 199

Query: 208 FGYDYFLQEEAGQKIA-FSFADEAIRQALVNLEAVAAPAGTMPVVLGSGWPGVLLHEAVG 266
             YDY +  +  + ++  S   +   + +  L A       +P++L       L+   +G
Sbjct: 200 RDYDYTIARKFNEMLSPESVGLKTAEKTVSRLGARKIATTRLPILLAPEIATGLIGHLIG 259

Query: 267 HGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDGTLKDLRGSLNVDDEGVSGQYNVLIEK 326
               G   RK SS     +  ++  D  +I +   L     S N D EGV+ Q   +I++
Sbjct: 260 AISGGSLYRK-SSFLLDAIHTQIFPDWFSIEEQPHLLGALASANYDSEGVATQDRRIIDR 318

Query: 327 GILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLPGEHTP---EEIIASVK 383
           G+L+ Y+    +AR + +  TG+                 Y     HT    +E++  + 
Sbjct: 319 GMLETYLLTSYSARKLSLPNTGHA-------------GGIYNWTLAHTGQGFDELVKGMG 365

Query: 384 KGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITRPIKGATLIGSGIEAMQQVSMVGN 443
            G+      G  V++ +G +   A+  Y +ENG++  P++  T+ G+  +  + +  V  
Sbjct: 366 TGLIVTEVMGQGVNMVTGDYSRGAAGFY-VENGEVQFPVEEITIAGNLKDMFRGIQAVSK 424

Query: 444 DLALDRGVGVCG 455
           D  L   +   G
Sbjct: 425 DFDLRSSIRTGG 436