Pairwise Alignments

Query, 1291 a.a., DUF3971 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1439 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score =  227 bits (579), Expect = 5e-63
 Identities = 304/1384 (21%), Positives = 539/1384 (38%), Gaps = 169/1384 (12%)

Query: 8    LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67
            LG  +  LL    I  AL +     +LP++  ++ +I+  ++      V+I  +   WR 
Sbjct: 37   LGFTVKLLLAGYFIFCALFLVLRYAVLPEIGHYKPQIERLVSAQIGRAVSIDVINASWRG 96

Query: 68   THPSLSLQTLQAHWPDSND-IQLNAASVEIEFDLLQSLWQRQPVVADLTVNGLVLDLRAI 126
              P LSL  +  H       + L   S  + +  +        VVA L +  L ++    
Sbjct: 97   LRPQLSLTNITVHDQQGEPALTLPQVSTTLSWSSV--------VVASLRLENLSIE--GA 146

Query: 127  DWLALEQNPNPKQSRQGRVV------KQLDDLLLRQLDDFTLKNSAILYRTFAGDLRQLD 180
            D LA+ ++   K    G  V        LD LL ++  +  +++S + +        +L 
Sbjct: 147  D-LAIRRDAGGKLFVAGIPVPTGGDGSSLDWLLSQR--EIVIRHSKLRWDDELRQAPELV 203

Query: 181  IEKL------RWQNQGLRHFAEGVVSIAG-ININSLLVSANFIDHGSLRDVSGDFYVSAD 233
            +E +      RW    L   A    S A  +++ +      F     +    G  Y    
Sbjct: 204  LEDVNLVLHNRWLRHRLSLRAIPPTSYAAPLDVRADFSHPAFARSSDILRWKGTLYADLQ 263

Query: 234  KVRVLPWLTRYLKDQTGIQKGQVSLNAWATLEHNQPKDGYVEFKPSELVWQNGEQTHELL 293
            +  +  W   Y      IQ G  S+ AW  L+H +  +   +   +    Q   Q   L 
Sbjct: 264  RTDLSVWRA-YFDYPIAIQSGTGSVRAWLALDHAKVANFTADLALNNFNAQLSRQLEPLS 322

Query: 294  LESGIVELKPTEK----------GWQVNAHSLRLRS------DDELWPLLDVAMDWQP-- 335
            L+     +  +E            +  N H + L        D  + P   +A  ++P  
Sbjct: 323  LKRVNGRISASESLGATPEDGIPTFGANGHQVTLTDFSIETPDGFVLPPTSIAESYEPGT 382

Query: 336  ----DEWRLNLSQLNIENLLPLAKLIPESQTLNHWLTTLKPKGTLEDVRIAKGATLESL- 390
                +   +  + LN++ L  LA  +P + +    L  L P+G L D  +    T   L 
Sbjct: 383  PLKAERTSVKATYLNLQTLSQLATRLPLAPSQRKLLDDLAPRGELRDFTVQWQGTYPELA 442

Query: 391  ------RYSASLIDGGIAQWELLPQVNALQ---AQIQGSPSKALIKASMVDDVLPYGEVF 441
                  R+S   + G  A  E  P+ NA Q   AQ  G P  + I    +D     G V 
Sbjct: 443  SYRVQGRFSGLGLKGLPAHVE--PRRNAAQQVRAQWAGFPGFSNIDGE-IDATEKGGSV- 498

Query: 442  QAPLNIRQGAVNLVWQQ------------EQYGWSLWSDKVTVATPDLQAL--------- 480
               L+ ++ A+ +  +Q             Q  W    D+      DL+ L         
Sbjct: 499  --KLDSQELAIEMPAEQFVESSMPFDSLKMQARWQYLKDQTLQV--DLEQLQFAQPGVAG 554

Query: 481  ---GAFRLDFPDDASPFLSFYAEADLFNAGETWRYLPTLALGRELTDYLSTAIQAGQVNT 537
               G         ++  +  + E   F+     RYLP   L   L  +L+  +  G +  
Sbjct: 555  SLSGRHVQPLQGKSAGSVDLHGELSRFDVKAIRRYLPR-HLSEPLRHWLTDGLVDGSLRD 613

Query: 538  AKLIWYGALDQFPYRMHN------GVFQAWVGLKEAKFAF----------DTAWPPITDL 581
             +    GAL  FP+          G FQ     +  K  +          +  WP + + 
Sbjct: 614  VQFTLKGALADFPFHTAKPGDKPKGQFQLSGDFEGLKLNYTPGHLGRDGKEPEWPLLEEG 673

Query: 582  QLDLLFENDAMYLDSRSATLMEVSAERITGRIPEL-AELGHIEIEAVASAQQGNAIRNYM 640
            +  L  +   + + + SA  +      +T R+ ++ +    +EIE VASA     +R Y+
Sbjct: 674  RGHLSIDRTRLEIKADSARTLGAKLGPVTARVADVDSHEAELEIEGVASAPMAVFLR-YV 732

Query: 641  MATPLVDSVGAALTTIQVKGPVRSEFQLNIPFHSGAEPRAWGFAELSNNAVDIDTPPMSL 700
              +P+    G  +      G  R + +  +P H   + RA G    +NN VD+      L
Sbjct: 733  NQSPVARWTGNLMEHSSATGEARLDLKFQMPLHHAIDTRAQGAFHFANNDVDLLPDLPVL 792

Query: 701  TSVSGKIEFDNDRVSAAGLDARLLKQPVSIDFKGEDAKRGY-------AVGIDMVGDWEV 753
               +GK+EF+    +  G+  + L   ++I   G   K G        A+ +DM+     
Sbjct: 793  YRTNGKVEFNEHGFTLNGVRGQFLGDALTIS--GGTQKDGSSQMRLEGAINVDMLRKQYP 850

Query: 754  KPLIPFVGERWLSRVKGHAPWQASVDIQLNDVGFTYQLDGKADLRGLESRYPFPLKKA-- 811
            +P +    +R L+R+ G   + A+V ++ +      +    + L GL    P PL+K+  
Sbjct: 851  EPSL----QRLLARLSGTTRYNATVLVRQHQPEVVVE----SSLAGLGVDLPVPLRKSAQ 902

Query: 812  --LKVKGQALLQASGNQEMVSARLQLPQAKYQAEIDLTPKVPVLKA----TNLVLGQGSF 865
              L ++ + L  AS +  +    L+L      A   +  +V    A    T+  +G    
Sbjct: 903  ESLPLRFELLPLASADPLIEREELKLALGSSIASRYVRERVAATGAAWRVTSGGIGWNQP 962

Query: 866  KISPVVGHHVQLRSQAFNLDDWLSILNEKPAP------KSRKSKLASLNTPAFPMPERVD 919
              SP  G  + L + +  +D WLS+ NE   P       +  ++L S +   +  P++V 
Sbjct: 963  APSPSAGLKLALAADSLEVDPWLSLKNELVGPAVAEDASAASTRLGSGDIAQYLAPDQVS 1022

Query: 920  AAVKELTFAGLDWHDVDLNARRKDLGWLLNLDSQEIKGQANYIE------PYDLSIALER 973
            A V EL+  G   + + L A  +   W ++L+SQ++ G   + E      P  ++  L  
Sbjct: 1023 ARVGELSLKGKKLNKLILEAAHRRNSWQISLESQQVAGTVTWDESGAARGPGKVTARLSS 1082

Query: 974  LHL--FLPQLEAGEEALLVDLDRQKLPLITDFDRKFHQWMPNLTLTIKDFWLQGYKIGQA 1031
            L +    P  E G   +  + D+ +              MP L +  + F L G K+G+ 
Sbjct: 1083 LVIPKSTPTAENGAATVASEDDKVQ--------------MPALDIRAEQFELGGKKLGRL 1128

Query: 1032 NVDFQRQGDTL--LWK--SIDFTSGTNQLHVNGTWTLTDTQSRTQMNLDMKGDNNSDLMA 1087
             +D      ++   W+   +   +   Q    G W    +   +     +  ++   L+ 
Sbjct: 1129 ELDASNMVTSVGREWRISRLLLANPDAQFRAAGNWMSFGSNHTSNFTYALDIEDAGKLLE 1188

Query: 1088 RFGINSGIQRAPFEITASTQWDGAPWSMQVNTLQGKVDTKLGKGVISDVS-GAARLLGLF 1146
            RFG    ++    ++     W   P++M + +L G+V   +  G    V  GAA+LLG+ 
Sbjct: 1189 RFGYPGTVRGGKGKLDGDLSWKAPPYAMDMASLAGQVHMDVHAGQFLKVDPGAAKLLGVL 1248

Query: 1147 SLDSIIRKMQLDFSDVFDKGMAFDSISGSGELSQGIFVTNNIKMDAVAGEMTIKGLADLN 1206
            +L ++ R++ LDF DVF +G AFD+++G+  +++GI  T+N+KM  V   + + G AD+ 
Sbjct: 1249 NLQALPRRLTLDFRDVFSEGFAFDTVAGTASINKGIASTDNLKMTGVTASVLMSGSADIA 1308

Query: 1207 TRTVDAEVNFVPDITSGIPVLTAFAVTPQTALYVLAITTVISPVVEVFTQVNYEVKGPLD 1266
              T D  V  +P+I  G   + A AV P   +  L     +   V       Y+V G   
Sbjct: 1309 RETQDLHVVVIPEINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLSFEYKVSGSWS 1368

Query: 1267 SPTV 1270
             P V
Sbjct: 1369 DPIV 1372