Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 1057 a.a., Ribonuclease E (EC 3.1.26.12) from Pseudomonas fluorescens FW300-N1B4

 Score =  280 bits (715), Expect = 2e-79
 Identities = 152/426 (35%), Positives = 251/426 (58%), Gaps = 7/426 (1%)

Query: 5   LLLNVT-PSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLD 63
           +L+N T P E RVA+++G  L ++ IE  A+     NIYKG+++R+ P ++AAFVD G +
Sbjct: 1   MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGRITRIEPSLEAAFVDFGSE 60

Query: 64  KAAFLHASDIVPHTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLTTDI 123
           +  FL   +I    E   ++ + +  ++D+   + +GQ+++VQV K+  G KGA LTT I
Sbjct: 61  RHGFLPLKEI--SREYFKKAPEGRVNIKDV---LSEGQEVIVQVEKEERGNKGAALTTFI 115

Query: 124 TLPSRYLVFMPGASHVG-VSQRIESEAERERLKKIVSHYCDEHGGFIIRTAAEGANEKEL 182
           +L  RYLV MP     G +S+RIE E   E  + +         G I+RTA  G + +E+
Sbjct: 116 SLAGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLVAPADMGLIVRTAGLGRSSEEM 175

Query: 183 TQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEFENL 242
             D  +L +LW+ + E         ++Y E  +  R +RD++  ++ ++LIDS +  +  
Sbjct: 176 QWDLDYLLQLWTAIKEASLDRSAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSVEAQDEA 235

Query: 243 KEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAMTT 302
             F  + +P+  +K++LY    P+F+ +  E++I+ + +R VEL SGG ++ID TEA+ +
Sbjct: 236 LTFIRQVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQRVVELPSGGSIVIDPTEALVS 295

Query: 303 IDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKRVLT 362
           IDIN+       ++EET   TN+EA + IARQLRLR++GG+I+IDFIDM   ++++ V  
Sbjct: 296 IDINSARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEE 355

Query: 363 SLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVETVCF 422
            +   L  DR +  +   ++ GL+EM+R+R R S+       CP C G G ++ VE++  
Sbjct: 356 KVRECLEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCNGTGIIRDVESLSL 415

Query: 423 EILREI 428
            ILR I
Sbjct: 416 AILRLI 421