Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 1060 a.a., ribonuclease, Rne/Rng family from Pseudomonas stutzeri RCH2

 Score =  288 bits (736), Expect = 9e-82
 Identities = 166/484 (34%), Positives = 275/484 (56%), Gaps = 7/484 (1%)

Query: 5   LLLNVT-PSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLD 63
           +L+N T P E RVA+++G  L ++ IE  A+     NIYKGK++RV P ++AAFVD G +
Sbjct: 4   MLINATQPEELRVALVDGQRLFDLDIESGAREQKKANIYKGKITRVEPSLEAAFVDFGAE 63

Query: 64  KAAFLHASDIVPHTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLTTDI 123
           +  FL   +I    E  ++S + +  ++D+   +R+GQ+++VQV K+  G KGA LTT I
Sbjct: 64  RHGFLPLKEI--SREYFSKSPEGRVNIKDV---LREGQEVIVQVEKEERGNKGAALTTFI 118

Query: 124 TLPSRYLVFMPGASHVG-VSQRIESEAERERLKKIVSHYCDEHGGFIIRTAAEGANEKEL 182
           +L  RYLV MP     G +S+RIE E   E  + +         G I+RTA  G + +EL
Sbjct: 119 SLAGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLDIPADMGLIVRTAGLGRSSEEL 178

Query: 183 TQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEFENL 242
             D  +L +LW+ V +         ++Y E  +  R +RD++  ++ ++LIDS +  +  
Sbjct: 179 QCDLDYLLQLWTAVKDASKDRAAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSVEAQDEA 238

Query: 243 KEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAMTT 302
             F  + +P+  +K++LY    P+F+ +  E++I+ + +R+V+L SGG ++ID TEA+ +
Sbjct: 239 LSFIQQVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQREVKLPSGGSIVIDPTEALVS 298

Query: 303 IDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKRVLT 362
           IDIN+       ++EET   TN+EA + IARQLRLR++GG+I+IDFIDM   ++++ V  
Sbjct: 299 IDINSARATKGGDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEE 358

Query: 363 SLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVETVCF 422
            +  AL  DR +  +   ++ GL+EM+R+R R S+       CP C G+G ++ VE++  
Sbjct: 359 KMREALEADRARIQVGRISRFGLLEMSRQRLRPSLGETSGIVCPRCNGQGIIRDVESLSL 418

Query: 423 EILREITRVNRAYDADKFVVYASPAVADTLQGEESHALAELEVFIGKEVRIQAEPLYNQE 482
            ILR I          +        VA  L  E+ +A+ ++E+     + I  +      
Sbjct: 419 AILRLIEEEALKDRTAEVRARVPFQVAAFLLNEKRNAITKIELRTRARIFILPDDHLETP 478

Query: 483 QFDV 486
            F+V
Sbjct: 479 HFEV 482