Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 1051 a.a., Rne/Rng family ribonuclease from Rhodopseudomonas palustris CGA009

 Score =  232 bits (592), Expect = 4e-65
 Identities = 129/397 (32%), Positives = 215/397 (54%), Gaps = 2/397 (0%)

Query: 93  ISELVRQGQDIVVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVG-VSQRIESEAER 151
           I E++++ Q ++VQVVK+  G KGA LTT ++L  RY V MP  +  G +S++I S  +R
Sbjct: 329 IQEVIKRRQVMLVQVVKEERGNKGAALTTYLSLAGRYAVLMPNTARGGGISRKITSAQDR 388

Query: 152 ERLKKIVSHYCDEHG-GFIIRTAAEGANEKELTQDAAFLKRLWSKVIERRSKYKNRSMLY 210
            RLK++V       G G I+RTA     + E+ +D  +L R+W  V +     +   ++Y
Sbjct: 389 SRLKEVVQDLDVPEGMGVILRTAGASRTKPEIKRDFEYLIRMWETVRDVTLNSQAPKLVY 448

Query: 211 GELGLAQRILRDFVGTELTKILIDSRQEFENLKEFTSEYVPELTAKLELYHGDKPIFDMY 270
            E  L +R LRD    E+ ++L+     +   ++F    +P     ++LY   +P+F   
Sbjct: 449 EEGSLIKRSLRDLYNKEIDEVLVAGEAGYREARDFMHMLMPSQVRAVKLYRDGQPLFSRM 508

Query: 271 DTENEIQRSLERKVELKSGGYLIIDQTEAMTTIDINTGAFVGRRNLEETIFNTNIEATQA 330
             E+++       V+L+SGGY++I+QTEA+ +ID+N+G      ++E+T   TN+EA + 
Sbjct: 509 GVESQLDAMFSPTVQLRSGGYIVINQTEALVSIDVNSGRSTREHHIEDTALKTNMEAAEE 568

Query: 331 IARQLRLRNLGGIIIIDFIDMASDEHRKRVLTSLETALMKDRVKTNINGFTQLGLVEMTR 390
           +ARQLRLR+L G+I+IDFIDM    + + V   L   L +DR +  +   +  GL+EM+R
Sbjct: 569 VARQLRLRDLAGLIVIDFIDMDEKRNNRAVERKLSDCLRQDRARIQVGRISHFGLLEMSR 628

Query: 391 KRTRESIEHVLCSTCPTCEGRGSVKTVETVCFEILREITRVNRAYDADKFVVYASPAVAD 450
           +R R S+       CP C G G V++V +V  ++LR +  V         +V     VA 
Sbjct: 629 QRIRASVLESSTEPCPHCGGSGHVRSVSSVALQLLRGLEEVLMKGATHNLIVRTRTDVAL 688

Query: 451 TLQGEESHALAELEVFIGKEVRIQAEPLYNQEQFDVV 487
            +   +   L +LE      + + A+P  + +Q  V+
Sbjct: 689 YVLNHKRGHLRDLETGFRVSLSVLADPTVSGQQSFVI 725



 Score = 60.1 bits (144), Expect = 4e-13
 Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%)

Query: 1  MSAELLLNVT-PSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVD 59
          M+ ++L++ T P ETRV ++ G  ++E   E   ++ + GNIY  KV+RV P +QAAF++
Sbjct: 1  MANKMLIDATHPEETRVVVVRGNRVEEFDFETAQRKQLRGNIYLAKVTRVEPSLQAAFIE 60

Query: 60 IGLDKAAFLHASDIVPHTECVAESEKQ 86
           G ++  FL  S+I P    +  +++Q
Sbjct: 61 YGGNRHGFLAFSEIHPDYYQIPVADRQ 87