Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., ribonuclease E/G family protein from Phaeobacter inhibens DSM 17395

 Score = 97.1 bits (240), Expect = 9e-25
 Identities = 99/398 (24%), Positives = 172/398 (43%), Gaps = 65/398 (16%)

Query: 5   LLLNVTPSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLDK 64
           ++L+        A++  G L+++ I+ +A     G IY+ +  R + G    F+    D 
Sbjct: 6   IILDHIDGREAAALMVDGQLEDLLIDSDAPTP--GTIYRARADRPVKGQGGMFLTTP-DG 62

Query: 65  AAFLHASDIVPHTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLTTDIT 124
            AFL                    QV+ ++     GQ+++VQ+       K   ++  + 
Sbjct: 63  PAFLR-------------------QVKGLAP----GQELLVQLTGYAEAGKALPVSQKLL 99

Query: 125 LPSRYLVFMPGASHVGVSQRIESEAERERLKKIVSHYCDEHG-GFIIRTAAEGANEKELT 183
             SRY +  P A  + +S+ I  E ER+RL +I      + G G I+R+A +GA+  ++ 
Sbjct: 100 FKSRYAIITPEAPGLNISRSIRDEEERDRLLEIAHDAIGDSGYGLILRSACDGADSTDIE 159

Query: 184 QDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEFENLK 243
           +D   +  L S+V+E             + G    +L +     L              +
Sbjct: 160 EDILAMVSLASQVLE-------------DAGSGPEVLAEGDTPHLLA-----------WR 195

Query: 244 EFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAMTTI 303
           ++T        A +E   G      + D    ++   E    L  G +L I+QT A+  +
Sbjct: 196 DWTDP------ADIEREAGGFERLGVLDALETVRGIRE---PLSGGAFLFIEQTRALVAV 246

Query: 304 DINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKRVLTS 363
           D+NTGA     +L   +   N+   +++AR LRLR LGG I++D   M   + R+   T+
Sbjct: 247 DVNTGA---DTSLAAGV-KANMACAKSLARALRLRGLGGQIVVDPAPMPKKD-RRAFETA 301

Query: 364 LETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVL 401
           L  +   D   T + G+T LG  E+ RKR R  ++ VL
Sbjct: 302 LRASFRSDSEDTVLVGWTTLGHFELQRKRGRIPLKEVL 339