Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., ribonuclease, Rne/Rng family from Dechlorosoma suillum PS

 Score =  553 bits (1424), Expect = e-162
 Identities = 275/493 (55%), Positives = 364/493 (73%), Gaps = 4/493 (0%)

Query: 1   MSAELLLNVTPSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDI 60
           M  E+L+N TP ETRVA++  G+ QE+HIER A  GIVGNIY GKV R+LPGMQ+AF+D+
Sbjct: 1   MPEEILINFTPQETRVAVMHQGVAQELHIERTASLGIVGNIYLGKVVRILPGMQSAFIDV 60

Query: 61  GLDKAAFLHASDI-VP-HTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGAR 118
           GL++ AFLH +DI +P H+E   E    +  +R I  ++ +GQ +VVQV+KDP+GTKGAR
Sbjct: 61  GLERTAFLHVADIWLPRHSEKNGEKGDGEGGMRPIERILTEGQSLVVQVIKDPIGTKGAR 120

Query: 119 LTTDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKIVSHYC--DEHGGFIIRTAAEG 176
           L+T I++  R LV++P   H+GVSQRIE E ERE+L++ ++     DE GGFI+RT AE 
Sbjct: 121 LSTQISIAGRMLVYLPQEKHIGVSQRIEDEQEREQLRERLTRLVPEDEKGGFIVRTMAEN 180

Query: 177 ANEKELTQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSR 236
           A+++EL  D  +L++ W  + E   +     +LY EL L+QR+LRDFV  E ++I+IDSR
Sbjct: 181 ASDEELANDIEYLRKTWRGIKENSLRVAPPHLLYQELSLSQRVLRDFVNPETSRIVIDSR 240

Query: 237 QEFENLKEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQ 296
           + F+ LKEF + Y P++   L+ Y G++P+FD++  E+EIQ++L R+V+LKSGGYLIIDQ
Sbjct: 241 ENFQKLKEFAALYTPKVLELLDHYTGERPLFDLHGVEDEIQKALARRVDLKSGGYLIIDQ 300

Query: 297 TEAMTTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEH 356
           TEAMTTID+NTG FVG RN ++TIF TN+EA Q IARQLRLRNLGGIII+DFIDM + EH
Sbjct: 301 TEAMTTIDVNTGGFVGVRNFDDTIFKTNLEAAQTIARQLRLRNLGGIIIVDFIDMENPEH 360

Query: 357 RKRVLTSLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKT 416
           R  VL     AL +D  K  +NGFT LGLVEMTRKRTRES+ HVLC TCPTC GRG VKT
Sbjct: 361 RDAVLAEFNKALARDHTKMTVNGFTALGLVEMTRKRTRESLAHVLCETCPTCGGRGEVKT 420

Query: 417 VETVCFEILREITRVNRAYDADKFVVYASPAVADTLQGEESHALAELEVFIGKEVRIQAE 476
             TVC+EILRE+ R  R ++A ++ + A+P+V D    EES +LA L  FIGK + +QAE
Sbjct: 421 ARTVCYEILRELLREARQFNAREYRILAAPSVIDLYLDEESQSLAMLSDFIGKAISLQAE 480

Query: 477 PLYNQEQFDVVMM 489
             YNQEQ+D+V+M
Sbjct: 481 ASYNQEQYDIVLM 493