Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 898 a.a., ribonuclease E from Caulobacter crescentus NA1000

 Score =  232 bits (591), Expect = 5e-65
 Identities = 150/484 (30%), Positives = 240/484 (49%), Gaps = 56/484 (11%)

Query: 1   MSAELLLNVTPSE-TRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVD 59
           MS ++L++   +E TRV +++G  ++E   E + ++ + GNIY  KV+RV P +QAAF++
Sbjct: 1   MSKKMLIDAAHAEETRVVVVDGTRVEEFDFESQTRKQLRGNIYLAKVTRVEPSLQAAFIE 60

Query: 60  IGLDKAAFLHASDIVPHTECVAESEKQQFQVRD---------ISELVRQGQD-------- 102
            G ++  FL  ++I P    +  ++++     D         IS     G D        
Sbjct: 61  YGGNRHGFLAFNEIHPDYYQIPVADREALMRDDSGDDEDDTPISRRASGGDDEDDVNGGD 120

Query: 103 ------------------------------------IVVQVVKDPLGTKGARLTTDITLP 126
                                               ++VQVVK+  G KGA LTT ++L 
Sbjct: 121 RAVDDDDDDVEEELARRKRRLMRKYKIQEVIRRRQIMLVQVVKEERGNKGAALTTYLSLA 180

Query: 127 SRYLVFMPG-ASHVGVSQRIESEAERERLKKIVSHYCDEHG-GFIIRTAAEGANEKELTQ 184
            RY V MP  A   G+S++I +  +R+RLK +V       G G I+RTA     + E+ +
Sbjct: 181 GRYGVLMPNTARGGGISRKITAVTDRKRLKSVVQSLDVPQGMGLIVRTAGAKRTKAEIKR 240

Query: 185 DAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEFENLKE 244
           D  +L RLW  + E        +++Y E  L +R +RD    +L  I ++    ++  ++
Sbjct: 241 DYEYLLRLWENIRENTLHSIAPALIYEEEDLVKRAIRDMYDKDLDGIWVEGDAGYKEARD 300

Query: 245 FTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAMTTID 304
           F    +P    K+  Y    P+F     E+ + +     V L+SGGYL+I+QTEA+  ID
Sbjct: 301 FMRMLMPSQAKKVFNYRDPTPLFVKNKIEDHLAQIYSPVVPLRSGGYLVINQTEALVAID 360

Query: 305 INTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKRVLTSL 364
           +N+G     RN+E T   TN EA +  ARQLRLR+L G+I+IDFIDM   ++ + V   L
Sbjct: 361 VNSGKATRERNIEATALKTNCEAAEEAARQLRLRDLAGLIVIDFIDMDEAKNNRTVEKVL 420

Query: 365 ETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVETVCFEI 424
           + AL  DR +  +   +  GL+E++R+R R  +       C  CEG G V++VE+     
Sbjct: 421 KDALKDDRARIQMGKISGFGLMEISRQRRRTGVLEGTTHVCEHCEGTGRVRSVESSALAA 480

Query: 425 LREI 428
           LR +
Sbjct: 481 LRAV 484