Pairwise Alignments

Query, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

Subject, 1097 a.a., ribonuclease E from Burkholderia phytofirmans PsJN

 Score =  266 bits (679), Expect = 4e-75
 Identities = 156/431 (36%), Positives = 245/431 (56%), Gaps = 14/431 (3%)

Query: 5   LLLNVTPSET-RVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLD 63
           +L N T  E  RVA+++G  L +I IE   +    GNIYKG ++R+ P ++A FV+ G D
Sbjct: 4   MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGIITRIEPSLEACFVNYGED 63

Query: 64  KAAFLHASDIVPHTECVAESEKQQFQVRD--ISELVRQGQDIVVQVVKDPLGTKGARLTT 121
           +  FL      P  E   +  +    +R   I + +R+GQ+++VQV K+  G KGA LTT
Sbjct: 64  RHGFL------PFKEVARQYFRDGVDMRSARIQDALREGQELIVQVEKEERGNKGAALTT 117

Query: 122 DITLPSRYLVFMPGASHVG-VSQRIESEAERERLKKIVSHYCDEHGGFIIRTAAEGANEK 180
            I+L  RYLV MP     G VS+RIE +  +E  + +      E    I RTA  G + +
Sbjct: 118 FISLAGRYLVLMPNNPRGGGVSRRIEGDDRQELRETMAQLQLPEGMSIIARTAGIGRSAE 177

Query: 181 ELTQDAAFLKRLWSKVIERRSKYKNRS---MLYGELGLAQRILRDFVGTELTKILIDSRQ 237
           EL  D  +L +LW + IE  S+  +     ++Y E  L  R +RD+   ++ +ILID+ +
Sbjct: 178 ELQWDLNYLMQLW-RAIEAASQSGSSGQPMLIYLESSLVIRAIRDYFQPDIGEILIDTTE 236

Query: 238 EFENLKEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQT 297
             +  + F    +P+  +K++ YH D P+F  +  E++I+ +  R V L SGG ++ID T
Sbjct: 237 IHDQARAFMDIVMPDNVSKVKRYHDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHT 296

Query: 298 EAMTTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHR 357
           EA+  ID+N+       ++EET   TN+EA   +ARQLRLR+LGG+I+IDFIDM S + +
Sbjct: 297 EALVAIDVNSARATKGADIEETAARTNLEAADEVARQLRLRDLGGLIVIDFIDMESAKSQ 356

Query: 358 KRVLTSLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTV 417
           + V   L+ AL  DR +  +   ++ GL+E++R+R R ++      TCP C G G ++  
Sbjct: 357 REVEQRLKDALKHDRARVQMGKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRDT 416

Query: 418 ETVCFEILREI 428
           E+   ++LR I
Sbjct: 417 ESSALQVLRII 427