Pairwise Alignments

Query, 347 a.a., rod shape-determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., Chaperone protein HscA from Pseudomonas fluorescens FW300-N2E2

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 87/362 (24%), Positives = 148/362 (40%), Gaps = 60/362 (16%)

Query: 13  LSIDLGTANTLIYVKGQGI---VLDE------PSVVAIRQDK---GRGGKTVAAVGH--- 57
           + IDLGT N+L+     G+   + DE      PS V    D    G   K  AA      
Sbjct: 22  VGIDLGTTNSLVAALRSGLSEPLADEQGRVILPSAVRYHADHVEVGESAKLAAATDPLNT 81

Query: 58  --AAKQMLGRTPGNISAIRPMKDGVIADFYVTEKMLQHFIRQVHDNSVLKPSPRVL---- 111
             + K+++GR    +S ++ + D +   F   E  +          S ++ S  +L    
Sbjct: 82  IVSVKRLMGR---GLSDVKQLGDQLPYRFVGGESHMPFIETVQGPKSPVEVSADILKVLR 138

Query: 112 ---------------VCVPCGSTQVERRAIRESALGAGAREVYLIDEPMAAAIGAGLRVS 156
                          + VP      +R+A +++A  AG   + L++EP AAA+  GL   
Sbjct: 139 QRAEAALGGELVGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAVAYGLDQH 198

Query: 157 EPTGSMVIDIGGGTTEVAVISLNGVVY-----SSSVRIGGDRFDEAIINYVRRNYGSLIG 211
                 + D+GGGT +++++ L G V+          +GGD FD AI  ++    G L  
Sbjct: 199 AEGLVAIYDLGGGTFDISILRLTGGVFEVLATGGDSALGGDDFDHAIAGWIIEQAG-LSA 257

Query: 212 EATAEKIKHEIGSAYPG----DDVQEIEVRGRNLAEGVPRSFTLNSNEILEALQEPLTGI 267
           +      +H + +A        D   +EV     A G  ++ TL S E  +AL EP+   
Sbjct: 258 DLDPGAQRHLLQTACAAKEALTDAATVEV-----AYGDWKA-TL-SREAFDALIEPM--- 307

Query: 268 VSAVMVALEQCPPELASDISE-NGMVLTGGGALLKDLDRLLMEETGIPVVIADDPLTCVA 326
           V+  + A  +   +   ++ +   +V+ GG   +  +   + E  G   +   DP   VA
Sbjct: 308 VARSLKACRRAVRDSGVELEDVKAVVMVGGSTRVPRVREAVAEAFGRQPLTEIDPDQVVA 367

Query: 327 RG 328
            G
Sbjct: 368 IG 369