Pairwise Alignments

Query, 347 a.a., rod shape-determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., molecular chaperone DnaK from Synechocystis sp000284455 PCC 6803

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 57/239 (23%)

Query: 13  LSIDLGTANTLIYVKGQGIVLDEPSVVAIRQDKGRGGKTVAAV-----------GHAAKQ 61
           + IDLGT N+ + V   G    +P+V+A       G +T  +V           G  AK+
Sbjct: 5   VGIDLGTTNSCVAVMEGG----KPTVIA----NAEGFRTTPSVVGYAKNGDRLVGQIAKR 56

Query: 62  MLGRTPGNIS---------------------AIRPMKDG---------VIADFYVTEKML 91
                PGN                       A   +KDG              +  E++ 
Sbjct: 57  QAVMNPGNTFYSVKRFIGRKFDEITNEATEVAYSVVKDGNGNVKLDCPAQGKQFAPEEIS 116

Query: 92  QHFIRQVHDNS---VLKPSPRVLVCVPCGSTQVERRAIRESALGAGAREVYLIDEPMAAA 148
              +R++ D++   + +   + ++ VP      +R+A +++   AG   + +I+EP AA+
Sbjct: 117 AQVLRKLVDDASKYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGIEVLRIINEPTAAS 176

Query: 149 IGAGLRVSEPTGSMVIDIGGGTTEVAVISLNGVVY-----SSSVRIGGDRFDEAIINYV 202
           +  GL   +    +V D+GGGT +V+++ +   V+     S    +GGD FD+ I++++
Sbjct: 177 LAYGLDKKDNETILVFDLGGGTFDVSILEVGEGVFEVLATSGDTHLGGDDFDKKIVDFL 235