Pairwise Alignments

Query, 347 a.a., rod shape-determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chaperone protein DnaK from Phaeobacter inhibens DSM 17395

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 80/346 (23%), Positives = 144/346 (41%), Gaps = 68/346 (19%)

Query: 10  SNDLSIDLGTANTLIYVK--GQGIVLDE-------PSVVAIRQDK---GRGGKTVAAVG- 56
           S  + IDLGT N+ + +    Q  V++        PS+VA   D+   G+  K  A    
Sbjct: 2   SKVIGIDLGTTNSCVAIMDGSQPRVIENAEGARTTPSIVAFTDDERLVGQPAKRQAVTNP 61

Query: 57  ----HAAKQMLGRTPGNISAIRPMKD-------GVIADFYVTEK-------MLQHFI--- 95
                  K+++GR   +    +  K+       G   D +V  K        +  FI   
Sbjct: 62  DNTVFGVKRLIGRRFDDSDLAKDKKNLPFAVINGGNGDAWVEAKGEKYSPSQISAFILGK 121

Query: 96  -RQVHDNSVLKPSPRVLVCVPCGSTQVERRAIRESALGAGAREVYLIDEPMAAAIGAGLR 154
            ++  ++ + +   + ++ VP      +R+A +++   AG   + +I+EP AAA+  GL 
Sbjct: 122 MKETAESYLGEEVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLD 181

Query: 155 VSEPTGSMVIDIGGGTTEVAVISLNGVVY-----SSSVRIGGDRFDEAIINYVRRNYGSL 209
             E     V D+GGGT +V ++ ++  ++     +    +GG+ FD  I+NY+   +   
Sbjct: 182 KEETQTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADQFKKE 241

Query: 210 IG-------------EATAEKIKHEIGSAYPGDDVQEIEVRGRNLAEGVPRSFTLNSNEI 256
            G             +  AEK K E+ S+   +  Q       + + G P    +   ++
Sbjct: 242 HGVDLTKDKMALQRLKEAAEKAKIELSSSSQTEINQPF--ISMDPSSGQPLHMVM---KL 296

Query: 257 LEALQEPLTGIVSAVMVALEQCPPEL------ASDISENGMVLTGG 296
             A  E L G    +  +++ C   L      ASD+ E  +VL GG
Sbjct: 297 TRAKLESLVG--DLIKASMKPCAAALKDAGLSASDVDE--VVLVGG 338