Pairwise Alignments

Query, 347 a.a., rod shape-determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., rod shape-determining protein MreB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  598 bits (1542), Expect = e-176
 Identities = 305/348 (87%), Positives = 330/348 (94%), Gaps = 1/348 (0%)

Query: 1   MFKKLRGMFSNDLSIDLGTANTLIYVKGQGIVLDEPSVVAIRQDKGRGG-KTVAAVGHAA 59
           MFKKLRG+FSNDLSIDLGTANTLIYV+ +GIVL+EPSVVAIR ++   G K+VAAVG  A
Sbjct: 1   MFKKLRGIFSNDLSIDLGTANTLIYVRDEGIVLNEPSVVAIRGERNSSGQKSVAAVGTEA 60

Query: 60  KQMLGRTPGNISAIRPMKDGVIADFYVTEKMLQHFIRQVHDNSVLKPSPRVLVCVPCGST 119
           KQMLGRTPGNI AIRPMKDGVIADFYVTEKMLQHFI+QVH+NS  +PSPRVLVCVP G+T
Sbjct: 61  KQMLGRTPGNIQAIRPMKDGVIADFYVTEKMLQHFIKQVHNNSFFRPSPRVLVCVPVGAT 120

Query: 120 QVERRAIRESALGAGAREVYLIDEPMAAAIGAGLRVSEPTGSMVIDIGGGTTEVAVISLN 179
           QVERRAIRESA+GAGAREVYLI+EPMAAAIGAGL VSE TGSMV+DIGGGTTEVA+ISLN
Sbjct: 121 QVERRAIRESAMGAGAREVYLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAIISLN 180

Query: 180 GVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAEKIKHEIGSAYPGDDVQEIEVRGR 239
           GVVYSSSVRIGGD+FD+AIINYVRRNYGSLIGEATAE+IKH IG+AYPGD+V EIEVRGR
Sbjct: 181 GVVYSSSVRIGGDKFDDAIINYVRRNYGSLIGEATAERIKHTIGTAYPGDEVLEIEVRGR 240

Query: 240 NLAEGVPRSFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISENGMVLTGGGAL 299
           NLAEGVPRSFTLNSNEILEALQEPL+GIVSAVMVALEQ PPELASDISE GMVLTGGGAL
Sbjct: 241 NLAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQSPPELASDISERGMVLTGGGAL 300

Query: 300 LKDLDRLLMEETGIPVVIADDPLTCVARGGGKALEMIDMHGGDLFSEE 347
           L+DLDRLLM+ETGIPV++ADDPLTCVARGGGKALEMIDMHGGDLFSEE
Sbjct: 301 LRDLDRLLMQETGIPVMVADDPLTCVARGGGKALEMIDMHGGDLFSEE 348