Pairwise Alignments

Query, 347 a.a., rod shape-determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., rod shape-determining-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.3 bits (155), Expect = 2e-15
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 12/146 (8%)

Query: 1   MFKKLRGMFSNDLSIDLGTANTLIYVKGQGIVLDEPSVVAIRQDKGRGGKTVAAVGHAAK 60
           MF  L+G+ S DL I+L  A   I   G    ++   ++A+  +  +    + A+GH A 
Sbjct: 1   MFTWLKGLISKDLLIELSEAKITINAFGDKASIEYEPLLALVTEHNK--MMIKAIGHEAS 58

Query: 61  QMLGRTPGNISAIRPMKDG--VIADFYVTEKMLQHFIRQVHDNSVLKPSPRVLVC----V 114
            + G     I  + P       +A F + EK+LQ+ I Q+H +S  + +PRV++      
Sbjct: 59  TLDGE---GIRIVNPFSHPRMFVASFALAEKLLQYGISQLH-SSGFRAAPRVILHQLEKT 114

Query: 115 PCGSTQVERRAIRESALGAGAREVYL 140
             G T +E R +RE A+GAGAREV +
Sbjct: 115 EGGLTDIEDRVLRELAMGAGAREVVI 140