Pairwise Alignments

Query, 1252 a.a., MSHA biogenesis protein MshQ from Vibrio cholerae E7946 ATCC 55056

Subject, 837 a.a., MSHA biogenesis protein MshQ (RefSeq) from Shewanella amazonensis SB2B

 Score =  330 bits (847), Expect = 2e-94
 Identities = 247/724 (34%), Positives = 349/724 (48%), Gaps = 59/724 (8%)

Query: 547  IDHFRFTLPQQGLTCSASEVQIKACANDNCSQLYTDPVTATLSPNSAPSATGGWLGGSQV 606
            IDHF     Q  LTC A  V + AC N NCS+L TDPV+ATL+   A +A  GW GG+ +
Sbjct: 155  IDHFLLQYSQSPLTCKAETVTVSACKNSNCSELVTDPVSATLT---ATNAVTGWEGGNNI 211

Query: 607  NFNNGIATAQLRRNSVGNVSVNVLGSTPASKPFQVNLCSYTNNPNSYSTANCTVNFADSG 666
            +  NG A  +L    V       +GS   S P  VN           STA CT  FADSG
Sbjct: 212  SLVNGSAQKRLWHTVVAPPVTIGVGS---SSPVAVNPTLCQRGSGMPSTAACTFAFADSG 268

Query: 667  FIVDVPNAYANQTVTGTIKAVRKDNASQQCLPSFGNVQKSVAFWSEYLNPTANNSGFQSV 726
             + DVP+  A +  + T+ AVRKD+ SQ+C+P+F N  K +AFWS+YL+P A  +   S 
Sbjct: 269  LLFDVPDKLAGKAASITLSAVRKDDQSQRCVPTFQNTTKQLAFWSDYLSPDA-VALVGSP 327

Query: 727  SVGVNGTPIGQSANNATSISLNFNQNGEASFPISYREVGSLALHARFTGSGDEQDLLLEG 786
             V V  + IG SA +ATSI L+FN  GEA   ++Y + G LAL+AR+ G G E +L L+G
Sbjct: 328  KVTVESSVIGTSAQDATSIPLSFNSQGEARLSVNYPDAGQLALNARYVGGGSEGNLQLDG 387

Query: 787  QDSFIRVPRALVLSANNPYNPTHPNGQCSAENISCNVFARADENFDLIIRAVVAAPIEDN 846
             DSF+  P  L + A +P         C A + +C  + +  ++FDL+I A       D+
Sbjct: 388  SDSFVSFPVGLCVKAKDPV------ASCPAGDATCAAYRKTGDSFDLLISAHAWESDTDS 441

Query: 847  DFTNNLTAYNYQQQNIALQHTLVQPSAGQSGVLGVNEYTH-LLGGTTTIAQKVSEVGVFD 905
            +F +N T  N+  QNIAL   LV P  G  GV G   Y+H    G   I Q +SEVGVF 
Sbjct: 442  EFCDNATTPNFAIQNIALGSALVAPVGGSDGVAGTASYSHKAQAGANEIGQSISEVGVFR 501

Query: 906  FSLFAPTHYLGLDLASANLPIAVTSTGSIGRFIPAYFSVSPMSNVTLDAACKTGN--AFS 963
            FS  AP  YLG    S    I +  +G+IGRF+PA F+   + NV+L  AC   N  +FS
Sbjct: 502  FSAQAPNTYLG----SQFYRIPLAQSGNIGRFVPAGFA---LKNVSLIPACGLLNSPSFS 554

Query: 964  YLGQPFEYSNSPGLYLQPKSANNADTQNYLIDPWWRYN------NQWNGRTYSDSAN--- 1014
            Y+GQP   S    + L+  +  N  T NY  D + + N      N  +G+  S   +   
Sbjct: 555  YMGQPTPLS----MQLEAHNHQNQVTVNYR-DDFAKGNAVLAAENDNDGQDLSARLSVLA 609

Query: 1015 -----GVNLGFDNLQTSPISRQALNNSGIVLNGERVWYQKPLQPKPVFNSAFDLTLNASN 1069
                 GV + FD+  T    R                   P +   +     D+  + S 
Sbjct: 610  GKWQQGV-MEFDSSSTFVFERTTAPG-----------VDGPFEQLDIGLWVDDMDGDLSR 657

Query: 1070 LTDQDGVCYRQNASSPCLGYTFSHIDGAMPLYWGKLVIQDVYGPETQASEQPIYVEHFTN 1129
            L   D         S   G   +   GA+ +  G+ V+ + YGPET     P Y +++  
Sbjct: 658  LAPLDMKPDSTGDCSILPGGCSAQRLGAVSMRHGRAVLDNTYGPETDILRMPAYAQYWNG 717

Query: 1130 NGFVRTIEDSCTALPAITGFTLQSDPNNNGYTVLTTGVAVPPQVLAEHSAANLNSGQRAI 1189
            + +  + EDSC+   A    + Q D    GY +   G+     +    + A+ + GQ  +
Sbjct: 718  SAWTLSSEDSCSI--ASVPLSFQVDNPALGY-LYQPGLLAGQSIDRSATPASFSQGQLPL 774

Query: 1190 RFSAPGA-GALGVIDSVLDLNAHNLLWLAEDKDGDNNFDQTTQGRAQFGLYRGSDRVIWW 1248
             + A G+ G  G + + LD+    L W       +       +  A FG YRG DR+I+W
Sbjct: 775  FWQALGSPGYRGQVTAPLDV-PDWLHWYWNWSGSEPQTLSDPRASAYFGRYRGDDRIIFW 833

Query: 1249 RESN 1252
            RE N
Sbjct: 834  REIN 837