Pairwise Alignments

Query, 1252 a.a., MSHA biogenesis protein MshQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1592 a.a., hypothetical protein from Dechlorosoma suillum PS

 Score =  184 bits (467), Expect = 5e-50
 Identities = 191/704 (27%), Positives = 294/704 (41%), Gaps = 106/704 (15%)

Query: 272  GYACFTDDFNRSSL-----GQNWIPYT-SSGNFTPSIISNRMRLTEAITNQATAVTYQRI 325
            G  C+ D F  S+L        W   T    ++TPS +S R+RLT+  TN+AT+ T   I
Sbjct: 682  GVTCYCDSFTGSNLTSGIFNSKWTVSTLGPRSYTPSFVSGRLRLTDNNTNEATSATLGAI 741

Query: 326  FPAAGNLVTVEFDYYAWANLTGNGADGVSVIFSDATVTPRTGGFGGSLGYAQRTDTNPDT 385
            FPAAGN ++VEF  +A+    G+GADG++V  SD +V P  G FGGSLGYAQ++      
Sbjct: 742  FPAAGNYISVEFRQFAY---NGSGADGLAVTLSDYSVAPNPGAFGGSLGYAQKSGI---- 794

Query: 386  PGFAGGWLGVGLDEWGNYSNATEGRQGGPGFRQQAVAIRGSESA---------NYQYLVG 436
             GFAGGW+GVG DE+GNY+N TEGR  GPG+  Q VA+RGS +A          Y YL  
Sbjct: 795  VGFAGGWIGVGFDEFGNYTNPTEGRIDGPGYFSQVVAVRGSYAATTPANLYSLGYPYLAR 854

Query: 437  TAANLNPKLDVRRTCQWWGCSFSGAGPGHRYFITIDSRS------GGGVWVRVDRSVNGT 490
            +A          RT        S A  G+ Y + ID+R+         + V  D S +  
Sbjct: 855  SAVQSGSNTIDNRTS-------SVASRGYYYQVVIDARNYTTANKTAQIQVNRDTSCSTD 907

Query: 491  MQTVIDWHNVLS-----------NPNQGATPADFLLSLAGSTGASVNNHEIENFKVCALK 539
                  + N+L+              Q   P ++ +S  GSTG+S N HEI   +VCA  
Sbjct: 908  FCPTTGYVNLLAPFDAYAPGFTPTTAQVPVPDNWQISFTGSTGSSTNIHEISGLRVCA-- 965

Query: 540  SRPVGQLIDHFRFTLPQQGLTCSASEVQIKACANDNC------SQLYTDPVTATLSPNSA 593
                       +  +P  G T S       A A  +       + +YT  V    + N A
Sbjct: 966  -----------QSIIPPNGTTASGFNAIDSAMARTDINVQQAGAHIYTKLVGVDFALNIA 1014

Query: 594  P-SATGGWLGGSQVNFNNGIATAQLRRNSVGNVSVNVLGSTPASKPFQVNLCSYTNNPNS 652
              ++ G  +  +    +N   T +L  NS    + N   +  A   F     S+T+    
Sbjct: 1015 VLNSAGTGIDSNYALTSNKTVTVELIDNS---TTANQAATCSAKSSFASTTMSFTSTDKG 1071

Query: 653  Y----------STANCTVNFADSGFIVDVPNAYANQTVTGTIKAVRKDNASQQCLPSFGN 702
            +          + +N  V   DS       + +A + ++ T    +  +       +   
Sbjct: 1072 FKLSPTFKINSAYSNVLVRMKDSTTTACSSDTFAIRPLSLTNVTAKVGSTDLVASSNGAG 1131

Query: 703  VQKSVAFWSEY-----LNPTANNSGFQSVSVGVNGTPIGQS-ANNATSISLNFN----QN 752
               +V   S++      +P++N SG  S+ V  N   +  S A +   +S  F+     +
Sbjct: 1132 AAMTVKAGSDFSLSATASPSSNYSGTPSI-VTANVIDVASSGAISPAPLSCAFSAADTSS 1190

Query: 753  GEASFPISYREVGSLALHARFTGSGDEQDLLLEGQDSFIRVPRALVLSANNPYNPTHPNG 812
            G  S    YREVG  +L            +   G+D        +V S +N    T  NG
Sbjct: 1191 GTVSGTCQYREVGYFSLPVDALIDNTFTTVDQNGRDD------CIVNSTSN----TLSNG 1240

Query: 813  Q--CSAENISCNVFAR-ADENFDLIIRAVVAAPIEDNDFTNNLTAYNYQQQNIALQHTLV 869
            +  C+    S   + R   ++F+L   A+            NL  + Y  + I L  ++ 
Sbjct: 1241 KYGCNIGTPSATSWGRFIPDHFELSAVALDNRSELTTCSNRNLDGFTYMGEPIGLGFSIA 1300

Query: 870  QPSAGQSGVLGVN---EYTHLLGGTTTIAQKVSEVGVFDFSLFA 910
              + G S     +    Y+ L  G    A   + +   +F+L+A
Sbjct: 1301 AKAVGGSTTENYDFGRGYSRLTMGNWLAAAGATPLDSNNFNLWA 1344



 Score = 48.1 bits (113), Expect = 6e-09
 Identities = 84/370 (22%), Positives = 136/370 (36%), Gaps = 68/370 (18%)

Query: 926  IAVTSTGSIGRFIPAYFSVSPMS--NVTLDAACKTGN--AFSYLGQPFEYSNSPGLYLQP 981
            I   S  S GRFIP +F +S ++  N +    C   N   F+Y+G+P       G  +  
Sbjct: 1246 IGTPSATSWGRFIPDHFELSAVALDNRSELTTCSNRNLDGFTYMGEPIGL----GFSIAA 1301

Query: 982  KSANNADTQNY---------LIDPW----------------WRYNNQWNGR-TYSDSANG 1015
            K+   + T+NY          +  W                W  +N   G  T      G
Sbjct: 1302 KAVGGSTTENYDFGRGYSRLTMGNWLAAAGATPLDSNNFNLWALDNPATGSATVFPGGGG 1361

Query: 1016 VNLGFDNLQTSPISRQALNN---SGIV-LNGERVWYQKPLQPKPVFNSAFDLTLNASNLT 1071
              LGF     S     +  N   +G+  + G  V  +      P  +     T+ A    
Sbjct: 1362 TRLGFTPGTVSTACSGSPTNRWCAGVATITGNLVLNRAATADGPYAS----FTIGAVP-R 1416

Query: 1072 DQDGVCYRQNASSPCLGYTFSHIDGAMP---LYWGKLVIQDVYGPETQASEQPIYVEHFT 1128
            DQDGV     A +     + S+    +    + +G L +   YG E       +    + 
Sbjct: 1417 DQDGVSLAATALNLDADQSGSNERAKLATTAVRFGLLQLTTAYGSELLPLSVGMEARFWN 1476

Query: 1129 NNGFVRTIEDSCTALPAITGFTLQSDPNNNGYTVLTTGVAVPPQVLAEHSAANLNSGQRA 1188
               FV   +D+CTA+      T  +     G T  T G     Q+ A         G+  
Sbjct: 1477 GLAFVLNAQDNCTAIQP----TNVASARVAGETAATLGAPTVTQIAA---------GKGR 1523

Query: 1189 IRFSAPGAGA-------LGVIDSVLDLNAHNLLWLAEDKDGDNNFDQTTQGRAQFGLYRG 1241
            +RF++PG  +       LG   +    ++  + ++    DG   FD+    RA FGL RG
Sbjct: 1524 LRFASPGLRSTFRVCVDLGGDANCAATSSAAMSYMTGRWDGSALFDRDPSARAAFGLNRG 1583

Query: 1242 SDRVIWWRES 1251
            +   +++RE+
Sbjct: 1584 A--YLYYREN 1591