Pairwise Alignments

Query, 203 a.a., MSHA pilin protein MshD from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., MSHA pilin protein MshD (RefSeq) from Shewanella amazonensis SB2B

 Score = 91.3 bits (225), Expect = 9e-24
 Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 32/197 (16%)

Query: 14  SMPVKPMIAKR--GFTLVEMIIVIVVLGVALVGVTTSLYPRSKQSAEQVLSVKAAELGRA 71
           S+   P+++KR  GFTLVE+++ ++VL +ALV +++  +P++ ++A  +  V++AEL ++
Sbjct: 4   SLSKMPVLSKRTAGFTLVELVVGMLVLAIALVLLSSMFFPQADRAAMTLQRVRSAELAQS 63

Query: 72  VLDEVLGRAFDQHSGPNGGLPECVITETAGRTLCSAPSALGKDT-----GESNNTEFNDV 126
           VL+E+ G+ +D+HS  NGG+P            C +PSAL   T     GES N +F+DV
Sbjct: 64  VLNEIWGKRYDEHSNINGGVP-----------ACGSPSALACSTHMGPEGESRN-DFDDV 111

Query: 127 DDYITSSPIPVTDVLGTDISSEYQRFSVSIQVFYVSDNGGQFSATPATERTHYKRIALVI 186
           DDY   +               Y  F ++++V          +++P       K IA+ +
Sbjct: 112 DDYHGLNETQFMLNSSQRYIDRYPGFKLTVEV---------STSSPLVS----KLIAIHV 158

Query: 187 YDPQGNAYPFAAIKGNY 203
             PQG    + A++ NY
Sbjct: 159 TTPQGEVITYHAVRSNY 175