Pairwise Alignments

Query, 203 a.a., MSHA pilin protein MshD from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., methylation site containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 93.2 bits (230), Expect = 3e-24
 Identities = 57/187 (30%), Positives = 102/187 (54%), Gaps = 25/187 (13%)

Query: 25  GFTLVEMIIVIVVLGVALVGVTTSLYPRSKQSAEQVLSVKAAELGRAVLDEVLGRAFDQH 84
           GFTL+E+++ ++VLG+ALV +T+ L+P++ ++AE +  V++AEL  ++L+E+ G+ +DQ+
Sbjct: 14  GFTLIELVVGMIVLGIALVMLTSMLFPQADRAAETLHRVRSAELAHSLLNEIWGKRYDQN 73

Query: 85  SGPNGGLPECVITETAGRTLCSAPSAL------GKDTGESNNTEFNDVDDYITSSPIPVT 138
           S PNGG+P C     A R     P+ L          G  +   + DVDDY        +
Sbjct: 74  SNPNGGVPAC---GAAARPDLGLPAGLPCTDQANFGPGGLDRNAYRDVDDY--HGLTQAS 128

Query: 139 DVLGTD--ISSEYQRFSVSIQVFYVSDNGGQFSATPATERTHYKRIALVIYDPQGNAYPF 196
            +L +D   + EY  + +S+ V Y           P +++ + K +A+ +  P G    +
Sbjct: 129 KMLNSDRTYAQEYINYQLSVSVTY-----------PGSDK-NSKLVAINVTTPSGEVITY 176

Query: 197 AAIKGNY 203
            A++ NY
Sbjct: 177 NALRSNY 183