Pairwise Alignments

Query, 162 a.a., MSHA pilin protein MshC from Vibrio cholerae E7946 ATCC 55056

Subject, 163 a.a., MSHA pilin protein MshC (RefSeq) from Shewanella amazonensis SB2B

 Score = 78.2 bits (191), Expect = 6e-20
 Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 10/162 (6%)

Query: 4   IGKGFTLIELVVVIILLGILSAYAASRFLGPSSFAVVTTQSEILASLRLTQSRAMQRTGY 63
           + +GFTLIELV  IIL+GIL+  A  R L  SS++  + ++E +A LR  Q  AM  T  
Sbjct: 7   LSRGFTLIELVTTIILIGILAVVAIPRLLSASSYSAYSLRNEFMAQLRKAQLFAMNNTDL 66

Query: 64  CNRWLLTSNAAIQVSP-QAMQGSCLSVFPSNPTDPSWVDAAVSGVALSLAGSGGASF-LD 121
           C R  ++S+   ++   Q+   +  S       +  W  +   G  L+L   G  SF LD
Sbjct: 67  CIRVAVSSDKGYRIERYQSRTSNQCSGAQDVAHEQPW-QSFQGGSELALLAGGTRSFNLD 125

Query: 122 FDSLGR--ATQCISAGCTVSISSSTHNEVRQVCINTEGYIYA 161
           FD+LGR  AT C +  C ++I+    +E   + I +EGYI+A
Sbjct: 126 FDTLGRLPATGC-NGDCILAIA----DETLVLAIESEGYIHA 162