Pairwise Alignments

Query, 162 a.a., MSHA pilin protein MshC from Vibrio cholerae E7946 ATCC 55056

Subject, 149 a.a., MSHA pilin protein MshC (RefSeq) from Shewanella loihica PV-4

 Score = 64.7 bits (156), Expect = 6e-16
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 12/155 (7%)

Query: 6   KGFTLIELVVVIILLGILSAYAASRFLGPSSFAVVTTQSEILASLRLTQSRAMQRTGYCN 65
           +GFTL+ELV  IIL+ ILS     RF   SS++  T + E+++ LR  Q  A+     C 
Sbjct: 5   QGFTLVELVTSIILIAILSVVVLPRFFTASSYSAYTLRDELISELRRVQLMALNNLDRCY 64

Query: 66  RWLLTSNAAIQVSPQAMQGSCLSVFPSNPTDPSWVDAAVSGVALSLAGSGGASFLDFDSL 125
           +        + V+  + +        ++ T      +     +LSL G    + L FD  
Sbjct: 65  K--------VSVTATSYRADIFGADCNSLTVTGNAQSLPRQTSLSLGGLNSFT-LTFDRD 115

Query: 126 GRATQCISAGCTVSISSSTHNEVRQVCINTEGYIY 160
           GR T   + GCT+ +++   +E   + I ++GYI+
Sbjct: 116 GRVTGSCATGCTIKVAA---DETLDLSIESQGYIH 147