Pairwise Alignments

Query, 178 a.a., MSHA pilin protein MshA from Vibrio cholerae E7946 ATCC 55056

Subject, 168 a.a., type IV pilin-like G/H family protein from Synechocystis sp000284455 PCC 6803

 Score = 53.9 bits (128), Expect = 1e-12
 Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 23/159 (14%)

Query: 5   KRQGGFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISYGRAA 64
           + +GGFTLIEL+VV++I+G+LA  A P  L   G ARE+  +   GA+           A
Sbjct: 17  RAEGGFTLIELLVVVIIIGVLAAIALPNLLGQVGKARESEAKSTIGAL---------NRA 67

Query: 65  IKGIETLDYTAYTDANT-PGTVIDGIAHKFGYPTAVNDSTANLGGIMQTLDTSSEFIALQ 123
            +G  T   T  TD  T      DG    F   TA N             +   +  AL 
Sbjct: 68  QQGYFTEKGTFATDTETLEVPAPDGNFFSFAVNTADN------------TEAIQDATALN 115

Query: 124 -SSTGTNSNQANLWIDIGFNGYNDLCVRYTAATSNNPAT 161
             + GT S     + D G   ++ +  R  A + + P T
Sbjct: 116 WEADGTRSMSGGTFYDSGTRAFSTVVCRAEAGSEDTPPT 154