Pairwise Alignments

Query, 178 a.a., MSHA pilin protein MshA from Vibrio cholerae E7946 ATCC 55056

Subject, 193 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 56.6 bits (135), Expect = 3e-13
 Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 9  GFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISYGRAAIKGI 68
          GFTLIELVVVI+ILG+LAV AAPRF+NL  DA +A  +    A    + + +      G 
Sbjct: 9  GFTLIELVVVIIILGVLAVVAAPRFMNLSQDAHDARAKAAFAAFTSGVKLYHSCWLAGGH 68

Query: 69 E--TLDYTAYTDANTPGT 84
             T D   Y D     T
Sbjct: 69 SGYTQDLACYGDGKLDST 86