Pairwise Alignments

Query, 184 a.a., MSHA biogenesis protein MshB from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., MSHA pilin protein MshB (RefSeq) from Shewanella amazonensis SB2B

 Score =  107 bits (268), Expect = 1e-28
 Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 15/156 (9%)

Query: 1   MKKMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQ 60
           MK  QQGFSL+ELVIVIV++GLLA  A+PRFL++TDEA+ AS++ V+GG  T V   RAQ
Sbjct: 1   MKAKQQGFSLIELVIVIVILGLLAATAIPRFLNITDEAEAASVDAVSGGLVTAVSFVRAQ 60

Query: 61  WEAQARPTLTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDATYPSGLTDQACID 120
           WE   R      N   +  DG    L        R GYP G N   AT    +TD  C  
Sbjct: 61  WEIDGR------NNDYVLLDGTQIGLDK------RFGYPTGDNNVSAT---DMTDATCQQ 105

Query: 121 LMNNLLQNPPQVGTETQAASNSNYKYSAKANSGAAT 156
           + N +LQ+ P+    TQ A    Y   A   +G ++
Sbjct: 106 VFNLILQSTPRNVLYTQDARKQRYTVRAIGGAGGSS 141