Pairwise Alignments

Query, 184 a.a., MSHA biogenesis protein MshB from Vibrio cholerae E7946 ATCC 55056

Subject, 193 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 3e-14
 Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 18/167 (10%)

Query: 1   MKKMQ--QGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSAR 58
           M ++Q  +GF+L+ELV+VI+++G+LAV A PRF++++ +A  A  +     F +GV    
Sbjct: 1   MSRLQTSKGFTLIELVVVIIILGVLAVVAAPRFMNLSQDAHDARAKAAFAAFTSGVKLYH 60

Query: 59  AQWEAQARPTLTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTD-DATYPSGLTDQA 117
           + W A      T +   +   DG     TT        G+PLG +TD  +T  + L    
Sbjct: 61  SCWLAGGHSGYTQD--LACYGDGKLDSTTT--------GFPLGEDTDQSSTQGTQLQGAY 110

Query: 118 CIDLMNNLLQNPPQV-----GTETQAASNSNYKYSAKANSGAATCTY 159
           C +L  +LL N   V       +T    +  Y YS  A S   T  Y
Sbjct: 111 CGELWQSLLDNQGTVLANHFDWQTTPNVDIVYWYSGGAISDPNTYCY 157