Pairwise Alignments

Query, 184 a.a., MSHA biogenesis protein MshB from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., MSHA pilin protein MshB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  112 bits (280), Expect = 4e-30
 Identities = 73/174 (41%), Positives = 96/174 (55%), Gaps = 28/174 (16%)

Query: 1   MKKMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQ 60
           MK  Q GFSL+ELVIVIV++GLLA  A+PRFL+VTD+A+ AS++GVAGG +T V   R+Q
Sbjct: 1   MKTKQNGFSLIELVIVIVILGLLAATAIPRFLNVTDDAEDASVDGVAGGLSTAVSFVRSQ 60

Query: 61  WEAQARPTLTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDATYPSGLTDQACID 120
           WE   R         S+  DG      TS +   R GYP G +  DAT    +TD +C  
Sbjct: 61  WEVDGRQN------SSVILDG------TSVSLDPRFGYPTGTSGTDAT---AMTDASCQQ 105

Query: 121 LMNNLLQNPPQVGTETQAASNSNYKY--------SAKANSGAAT-----CTYAQ 161
           + N +LQ+ P+    +Q A N  Y          SA + +GAA      C Y Q
Sbjct: 106 VFNTVLQSAPRNVLYSQDARNQRYTVRVIDGAGGSANSITGAAVSGLDLCVYHQ 159