Pairwise Alignments

Query, 184 a.a., MSHA biogenesis protein MshB from Vibrio cholerae E7946 ATCC 55056

Subject, 172 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.8 bits (125), Expect = 3e-12
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 22/124 (17%)

Query: 1   MKKMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQ 60
           M     GF+L+ELV+VI+++G+LAV A P+F+++  +A K+ + G      + V   +A+
Sbjct: 1   MTNKNAGFTLIELVVVIIILGILAVVAAPKFINLQSDAYKSQLSGAFASMKSAVTLFKAK 60

Query: 61  WEAQARPTLTANNYPS--INYDGV---NF--WLTTSATSGYRDGY--------PLGLNTD 105
            E        AN  PS  + +DG+   N+  W  +S  +    GY          GLN +
Sbjct: 61  SE-------IANTGPSNRVVFDGIRGENYQPWAASSNGTLPSAGYTTPPEIFNAAGLNVN 113

Query: 106 DATY 109
           D  Y
Sbjct: 114 DWAY 117