Pairwise Alignments

Query, 184 a.a., MSHA biogenesis protein MshB from Vibrio cholerae E7946 ATCC 55056

Subject, 186 a.a., pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.5 bits (158), Expect = 5e-16
 Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 15/180 (8%)

Query: 7   GFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQWEAQ-- 64
           GF+L+ELV+VI+V+G+LAV ALP+F++V  +A+ A+++    GF +G+  AR+ W  +  
Sbjct: 15  GFTLIELVVVIIVLGVLAVVALPKFINVQQDAQIATVKAAGAGFKSGLNLARSVWAVKVG 74

Query: 65  ARPTLTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDATYPSGLTDQACIDLMNN 124
           + P      + +   + V+F         Y  G     + D+         + C+ +   
Sbjct: 75  SGPKEDLPVFGTAQSEQVDFNANGWPVQHYIYGNEASPSLDNV--------EDCVSVWEV 126

Query: 125 LLQN-PPQVGTETQAASNSNYKYSAKANSGAATCTYAQNEKGSQHEFVYEVNTGRVTVTL 183
           L QN  P V      A+ ++YK ++  +       Y  N+K S     Y+  TG VT  L
Sbjct: 127 LFQNSQPSVSRLNIDATETDYK-ASYISPNQCRYFYRANDKLS---IYYDSRTGTVTTDL 182