Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  213 bits (541), Expect = 1e-59
 Identities = 129/408 (31%), Positives = 218/408 (53%), Gaps = 12/408 (2%)

Query: 1   MATFYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALL 60
           M  F Y+  +ADG    G ++A    +  EM L +  +   +  G    S     W  + 
Sbjct: 1   MGLFNYKAVDADGRMIQGRLDAINL-VDLEMRLKR--MEMDLVNGTPVSS-----WD-MF 51

Query: 61  TPSVPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLS 120
             SVP   L+ FC  +  L +AGVP+L  +  L  +  + + +  + S+   +  G+ LS
Sbjct: 52  GGSVPRRELINFCFHLEQLNRAGVPILEGLSDLRDSLEHPRFREVIASLVESIEGGQTLS 111

Query: 121 ASMQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVIT 180
            +M LHP +F+ +FVS+++ GE TG+L + L  L    + E E   + K  + YP FV T
Sbjct: 112 QAMALHPRVFTKVFVSLVRAGELTGQLSEVLQNLTESLKWEDEIASQTKKLLMYPAFVGT 171

Query: 181 FVLLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAF 240
            VL A F L V ++PQ        G +LP  TR L   SD  VNYW L L ++  L  A 
Sbjct: 172 IVLGATFFLMVYMVPQLKQFVRNMGQELPAQTRALFFVSDLLVNYWYLAL-LLPILGIAL 230

Query: 241 RAWVNTTNGRIR--WDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAE 298
            +++  TN  +R  +D  +L++P+ G I+ +  LSRFA TF+L+ S+G+P+ +S+  + E
Sbjct: 231 LSYLLHTNPAVRHGFDAFKLKLPVFGPILKKIVLSRFANTFALLYSSGIPILESIRTTEE 290

Query: 299 AIDNKFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSD 358
            + N+ + Q + +++  I  G  V+       +F PLVI+M+ VGE TG +D  L  VS 
Sbjct: 291 VVGNRVIRQGLEKVEQLIGEGQNVTTAFHTIGLFPPLVIRMLRVGESTGSLDTALRNVSY 350

Query: 359 FYDREVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMWGMMDALK 406
           F++R+V   ++ + + IEP L + + +++  + L +  P++ ++  +K
Sbjct: 351 FFNRDVKESVEKIQSLIEPALTLILGSVLGWIMLAVLGPVYDVISKIK 398