Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  222 bits (566), Expect = 1e-62
 Identities = 122/399 (30%), Positives = 226/399 (56%), Gaps = 12/399 (3%)

Query: 4   FYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALLTPS 63
           F ++G++  G    G + A +E +    L  +G++ T ++     K  F    K      
Sbjct: 23  FVWEGKDKTGKIIRGELRATSETVVQATLRRQGVLVTKVS-----KQRFKSGGK------ 71

Query: 64  VPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLSASM 123
           +  + + +F RQ+ ++ K+GVPLL++   + +   N  +   L  +  ++  G  L+ + 
Sbjct: 72  ITDKDITLFTRQLATMMKSGVPLLQAFDIVGKGHSNPAVGKLLLDIKADVETGSALNQAF 131

Query: 124 QLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVITFVL 183
           + +P  F  LF ++I  GE  G LD  L +LA Y E+ +  + +IK+A+ YP  VI    
Sbjct: 132 RKYPLYFDSLFCNLIGAGEQAGILDTLLDRLAIYKEKILAVKSKIKSALFYPIAVIVVAF 191

Query: 184 LAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAF-RA 242
               ++ + VIP F  +F  FG DLP PT ++I  SDFFV YW L+ GI+ G +++F  +
Sbjct: 192 CITAVIMIFVIPAFKEVFKSFGADLPAPTLVVIAISDFFVAYWYLIFGILGGGIYSFLES 251

Query: 243 WVNTTNGRIRWDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAEAIDN 302
           W  +   +I  D   LRMPI G ++ ++ ++R+ RT + M +AGVPL ++L     A  N
Sbjct: 252 WKRSEAVQIAMDKALLRMPIFGPLIRKSVIARWTRTLATMFAAGVPLVEALDSVGGASGN 311

Query: 303 KFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSDFYDR 362
              +    +++S++ +G +++ +  N N+F  +VIQM+++GEE+G +D +L +V+DF++ 
Sbjct: 312 HVYKMATRQIQSEVSTGTSLTNSMQNVNLFPNMVIQMVAIGEESGALDSMLSKVADFFEA 371

Query: 363 EVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMWGM 401
           EVD  +  L++ +EPI++V +  ++  + + ++LP++ M
Sbjct: 372 EVDDSVAALSSLMEPIIMVILGVLIGGMVVAMYLPIFKM 410