Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  351 bits (900), Expect = e-101
 Identities = 173/402 (43%), Positives = 270/402 (67%), Gaps = 1/402 (0%)

Query: 1   MATFYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALL 60
           MA F Y+GR++ G   +G +EA +    A+ LL +GI P  I     ++      +   L
Sbjct: 1   MANFSYRGRSSGGGLVNGSLEAMSASAVADQLLLQGITPLEIKPAPKQEDGAGLKFNLTL 60

Query: 61  TPSVPLEV-LVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNL 119
                  V +++F RQ+++L KAGVP++R++ GL ++  N  +K  L  V   L +GR L
Sbjct: 61  FAEKVRHVDVLLFSRQIYTLLKAGVPIMRALAGLQESSSNGAMKRLLQEVRESLDSGREL 120

Query: 120 SASMQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVI 179
           SAS+  HP +F P ++SM++VGE TGRL++  L+L  + + E   R ++K+A+RYP+FV+
Sbjct: 121 SASLARHPTVFPPFYLSMVRVGEMTGRLEEIFLRLFYHLDFEQFMRNQVKSALRYPSFVV 180

Query: 180 TFVLLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFA 239
             + +A+ ++N+ VIP F  +F  F  +LP  TR+LI  SDF V  W  LL  +VG++FA
Sbjct: 181 AAMAIAIVVVNIWVIPAFAQVFKGFNAELPFMTRLLINFSDFMVADWPYLLAGLVGIIFA 240

Query: 240 FRAWVNTTNGRIRWDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAEA 299
           FRAWV T  GR  WD  +LR+PI G IV +A L+RF+R+F+L + +GVP+ Q++++ A+ 
Sbjct: 241 FRAWVATPMGRYLWDRTKLRVPIAGKIVEKATLARFSRSFALAVRSGVPVVQAMSVVAQT 300

Query: 300 IDNKFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSDF 359
           +DN F+  +I +M+  +E G +V  TAI+A +FTP+V+QM++VGEE+G +D+++ EV+D 
Sbjct: 301 VDNVFIADKIEKMREGVERGESVLRTAISARVFTPIVLQMVAVGEESGALDDMMEEVADM 360

Query: 360 YDREVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMWGM 401
           Y REV+Y+LK L+ +IEPIL+V +  +VLVLALGIFLP+W +
Sbjct: 361 YQREVEYELKNLSQQIEPILIVALGILVLVLALGIFLPIWDL 402