Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., type II secretion system protein from Marinobacter adhaerens HP15

 Score =  353 bits (905), Expect = e-102
 Identities = 175/405 (43%), Positives = 263/405 (64%), Gaps = 1/405 (0%)

Query: 4   FYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFD-FNWKALLTP 62
           F Y+G++  G    GL+ A   + AA  L+ +GI P +I +    +S  D  N   +   
Sbjct: 3   FSYRGKDDRGGVQQGLLGAPNADAAATELMRRGITPLAIREVQETESVIDRLNRLPIFRK 62

Query: 63  SVPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLSAS 122
            V L+ L++FCRQM +LTKAG+PL+R+MRGLA+   +  L   L+ V   L  G  ++ +
Sbjct: 63  KVTLDELIVFCRQMHALTKAGIPLIRTMRGLAETTRSPVLAEVLEDVTTRLEGGTTMATA 122

Query: 123 MQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVITFV 182
           MQ HP +FS LF++MI VGENTG LD A  +L+   E E +T++R+K AMRYP FVI  +
Sbjct: 123 MQAHPKVFSELFIAMIHVGENTGMLDDAFRRLSEILELERDTKRRLKQAMRYPMFVIIAL 182

Query: 183 LLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAFRA 242
           L A+ I+N  VIP+F S+F++ G DLP  T++L+ TS+F + YW ++L  +       R 
Sbjct: 183 LSALMIVNFLVIPKFASVFNKLGADLPFLTQVLVGTSNFLLAYWYVMLFAVAAGGLLLRQ 242

Query: 243 WVNTTNGRIRWDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAEAIDN 302
           W  T  GR+ WD  +L++PI+G ++    LSRF+R F+ MLSAG+P+  +L + A+  DN
Sbjct: 243 WKQTEQGRLTWDRYKLKLPIIGPLLELITLSRFSRNFATMLSAGMPVTTALTVVADTTDN 302

Query: 303 KFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSDFYDR 362
            ++   I +M++ IE G ++  TA ++ +FTPL++QM++VGEETG +D++L  V+DFYD 
Sbjct: 303 AWISSHIKDMRAGIERGESLLRTARHSEMFTPLILQMIAVGEETGSVDDMLNNVADFYDE 362

Query: 363 EVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMWGMMDALKG 407
           +VDY LK L   IEPIL+V +  +VL+LALG+FLP+W +  A  G
Sbjct: 363 DVDYGLKRLAESIEPILIVAMGILVLILALGVFLPIWDLGAAAMG 407