Pairwise Alignments

Query, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., general secretion pathway protein F from Marinobacter adhaerens HP15

 Score =  178 bits (452), Expect = 2e-49
 Identities = 100/401 (24%), Positives = 201/401 (50%), Gaps = 3/401 (0%)

Query: 1   MATFYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALL 60
           M  + Y+  ++ G +  G+VEA       + L  +G+ P ++ + AAEK        +  
Sbjct: 1   MPAYEYKALDSRGKQKQGVVEADAPRAVRQQLRERGLTPLAV-EPAAEKQTRSNPLSS-- 57

Query: 61  TPSVPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLS 120
             S+    L +  RQ+ +L ++G+P+ +++   AQ     ++++ L ++  ++  G  L+
Sbjct: 58  RGSLAAADLALVTRQLATLIQSGIPIEQALSAAAQQSPKPRIRSMLIAIRAKVMEGYTLA 117

Query: 121 ASMQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVIT 180
            S+   P  F  L+ S +  GE+ G LD  L +LA Y E   E R++I+ A  YP  +  
Sbjct: 118 DSLGEFPRAFPRLYRSTVAAGEHAGHLDLVLNRLADYTENRQEARQKIQLAAIYPIILSI 177

Query: 181 FVLLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAF 240
             +  +  L   V+P    +F + G +LP  T  ++  S+F  +Y   L  ++V  L  F
Sbjct: 178 VAIAIVVFLLTYVVPDIIDVFLKQGQELPTLTMAMLAVSEFLADYGVYLFILLVAALMVF 237

Query: 241 RAWVNTTNGRIRWDHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALSAEAI 300
           R ++     R+R+    L +P+   +V     +R+A T S++ ++GVPL +++ ++ E +
Sbjct: 238 RFFLTKPGFRLRFHKRLLHLPLFSGMVRGVNTARYASTLSILTTSGVPLVEAMRIAGEVL 297

Query: 301 DNKFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEVSDFY 360
            N FL Q + +   ++  G ++  +      F P+++ M++ GE +G +D +L   +   
Sbjct: 298 SNDFLRQELRDAARKVSEGGSLHRSLDQTGYFPPMMLHMIASGEASGELDSMLERTARMQ 357

Query: 361 DREVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMWGM 401
           +  +   +  +    EP++L+ +  +VL++ L I LP+  M
Sbjct: 358 ENTLQSKIAAIVGLFEPMMLLVMGVVVLIIVLAIMLPILNM 398